Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038489.1-P Field mustard mitochondrion 85.22 85.22
CDY60192 Canola mitochondrion 85.22 85.22
CDY40532 Canola mitochondrion 84.58 84.22
GSMUA_Achr8P31180_001 Banana cytosol 23.98 69.14
Solyc04g080090.2.1 Tomato mitochondrion, plastid 48.39 59.63
PGSC0003DMT400013180 Potato mitochondrion 49.46 58.78
KRH05793 Soybean mitochondrion 60.17 55.53
KRH15248 Soybean mitochondrion 59.96 55.34
Solyc12g089090.1.1 Tomato mitochondrion 61.03 54.91
PGSC0003DMT400039957 Potato mitochondrion 60.81 54.72
TraesCS6A01G111100.1 Wheat mitochondrion 44.75 54.43
TraesCS6D01G099700.1 Wheat mitochondrion 44.54 53.89
VIT_18s0001g12160.t01 Wine grape extracellular 59.74 53.76
AT5G66720.1 Thale cress plastid 47.11 53.14
GSMUA_Achr6P35080_001 Banana plastid 52.46 51.91
GSMUA_Achr9P09210_001 Banana mitochondrion, plastid 51.39 51.06
TraesCS6B01G139200.1 Wheat mitochondrion 44.11 50.49
HORVU6Hr1G019900.1 Barley plastid 44.97 48.84
GSMUA_AchrUn_... Banana plastid 47.75 47.25
Os03t0809300-01 Rice plastid 46.9 45.72
EER90674 Sorghum mitochondrion, plastid 45.61 45.71
Zm00001d013027_P002 Maize mitochondrion 45.18 45.09
Zm00001d034575_P001 Maize plastid 44.75 44.85
AT2G30170.1 Thale cress mitochondrion, plastid 20.56 32.21
GSMUA_Achr8P31190_001 Banana endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole 22.27 30.41
AT4G33500.1 Thale cress plastid 25.48 16.44
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16Gene3D:3.60.40.10MapMan:35.1EntrezGene:827359ProteinID:AEE83773.1
EMBL:AK117940ArrayExpress:AT4G16580EnsemblPlantsGene:AT4G16580RefSeq:AT4G16580TAIR:AT4G16580RefSeq:AT4G16580-TAIR-G
EnsemblPlants:AT4G16580.1TAIR:AT4G16580.1EMBL:BT005292ProteinID:CAB46038.1ProteinID:CAB78700.1GO:GO:0003674
GO:GO:0003824GO:GO:0004721GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872InterPro:IPR001932
InterPro:IPR036457RefSeq:NP_193391.3PFAM:PF07228PO:PO:0000293InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_dom
PFscan:PS51746PANTHER:PTHR12320PANTHER:PTHR12320:SF16UniProt:Q9SUK9SMART:SM00331SMART:SM00332
SUPFAM:SSF81606UniParc:UPI000034F0A0SEG:seg:::
Description
Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
Coordinates
chr4:-:9340920..9343074
Molecular Weight (calculated)
50299.5 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.252
Length
467 amino acids
Sequence
(BLAST)
001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.