CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60192	Canola	mitochondrion	96.38	96.79
Bra038489.1-P	Field mustard	mitochondrion	96.16	96.57
AT4G16580.1	Thale cress	mitochondrion	84.22	84.58
GSMUA_Achr8P31180_001	Banana	cytosol	23.67	68.52
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	47.55	58.84
PGSC0003DMT400013180	Potato	mitochondrion	48.61	58.02
KRH15248	Soybean	mitochondrion	61.41	56.92
KRH05793	Soybean	mitochondrion	60.98	56.52
TraesCS6A01G111100.1	Wheat	mitochondrion	45.63	55.73
TraesCS6D01G099700.1	Wheat	mitochondrion	45.2	54.92
Solyc12g089090.1.1	Tomato	mitochondrion	60.13	54.34
PGSC0003DMT400039957	Potato	mitochondrion	59.49	53.76
VIT_18s0001g12160.t01	Wine grape	extracellular	59.49	53.76
CDY53852	Canola	plastid	45.42	52.08
CDY30759	Canola	plastid	45.42	51.95
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	52.03	51.91
TraesCS6B01G139200.1	Wheat	mitochondrion	44.99	51.72
GSMUA_Achr6P35080_001	Banana	plastid	51.6	51.27
HORVU6Hr1G019900.1	Barley	plastid	46.06	50.23
GSMUA_AchrUn_...	Banana	plastid	48.83	48.52
EER90674	Sorghum	mitochondrion, plastid	45.63	45.92
Zm00001d034575_P001	Maize	plastid	44.99	45.28
Zm00001d013027_P002	Maize	mitochondrion	44.99	45.09
Os03t0809300-01	Rice	plastid	45.84	44.89
CDY10717	Canola	plastid	20.26	31.56
CDY02041	Canola	plastid	20.04	31.23
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	21.75	29.82
CDY72337	Canola	cytosol, peroxisome	22.17	29.46
CDX68984	Canola	plastid	24.09	16.17
CDX75361	Canola	plastid	22.81	12.69

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078HRW2	UniProt:A0A078HRW2
EnsemblPlants:CDY40532	ProteinID:CDY40532	ProteinID:CDY40532.1	GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:GSBRNA2T00069849001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EE297A

Description

BnaC01g19800DBnaC01g19800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRW2]

Coordinates

chrLK032473:+:243689..245677

Molecular Weight (calculated)

50132.1 Da

IEP (calculated)

7.325

GRAVY (calculated)

-0.209

Length

469 amino acids

Sequence
(BLAST)

001: MLPVREGLQK QVKILIGLGF GGYRGFHSRF AHPNRFLEPA SSDLLLSNER RNLSVLGALS RTFSVPSVSG PAFQVCGYHI DLLLSDASLR SVGESMASLG
101: GSKSLFLDRR FDPSVSGVMV CGDGRSRGRI SMRLRGRDHG DNNSTVYGYF AYRAAKKWIA FNPKTGGLGF RGLHSSLLSR FSVGNAPDVS FDSSPAEELA
201: KGSSDSVADK LCVKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIH DEPKGSIDPA RVLEKAHTST
301: KSQGSSTACI IALTDQGLNA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGSNGD LPSSGQMFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVQ
401: AVRAGTDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGRTLK

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.