CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67941
CDX86457
CDX94520
CDY01615
CDY07541
CDY08148
CDY09318
CDY21311
CDY24170
CDY36901
CDY36943
CDY37566
CDY41114
CDY44976
CDY51918
CDY58069
CDY58070
CDY58518
CDY70430
CDY70805
CDY71607

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66720.1	CDX67941	AT1G80040.1	21798944
AT5G66720.1	CDY37566	AT1G80040.1	21798944
AT5G66720.1	CDY41114	AT1G80040.1	21798944
AT5G66720.1	CDY70430	AT1G80040.1	21798944
AT5G66720.1	CDX86457	AT3G27960.1	21798944
AT5G66720.1	CDY58518	AT3G27960.1	21798944
AT5G66720.1	CDY24170	AT3G47620.1	21798944
AT5G66720.1	CDY36943	AT3G47620.1	21798944
AT5G66720.1	CDY36901	AT3G48150.1	21798944
AT5G66720.1	CDY44976	AT3G48150.1	21798944
AT5G66720.1	CDY58069	AT3G48150.1	21798944
AT5G66720.1	CDY58070	AT3G48150.1	21798944
AT5G66720.1	CDY70805	AT3G48150.1	21798944
AT5G66720.1	CDY08148	AT3G49580.1	21798944
AT5G66720.1	CDX94520	AT4G19700.1	21798944
AT5G66720.1	CDY01615	AT4G19700.1	21798944
AT5G66720.1	CDY07541	AT4G19700.1	21798944
AT5G66720.1	CDY09318	AT4G19700.1	21798944
AT5G66720.1	CDY21311	AT4G19700.1	21798944
AT5G66720.1	CDY51918	AT4G19700.1	21798944
AT5G66720.1	CDY71607	AT4G19700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012095.1-P	Field mustard	plastid	97.07	97.31
CDY53852	Canola	plastid	95.85	96.09
AT5G66720.1	Thale cress	plastid	78.05	77.29
VIT_04s0023g01400.t01	Wine grape	plastid	53.41	57.78
KRH69944	Soybean	cytosol, plastid	47.8	53.85
KRH08301	Soybean	cytosol	49.02	53.17
KRH28642	Soybean	mitochondrion	48.78	47.28
CDY60192	Canola	mitochondrion	52.44	46.04
CDY40532	Canola	mitochondrion	51.95	45.42
KRH76843	Soybean	plastid	47.32	43.99
EER90674	Sorghum	mitochondrion, plastid	44.88	39.48
Zm00001d034575_P001	Maize	plastid	44.63	39.27
Zm00001d013027_P002	Maize	mitochondrion	44.39	38.89
Os03t0809300-01	Rice	plastid	44.88	38.41
CDY10717	Canola	plastid	21.46	29.24
CDY02041	Canola	plastid	21.22	28.9
CDY72337	Canola	cytosol, peroxisome	22.93	26.63
CDX68984	Canola	plastid	23.41	13.73
CDX75361	Canola	plastid	21.46	10.44

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078GZY1	UniProt:A0A078GZY1
EnsemblPlants:CDY30759	ProteinID:CDY30759	ProteinID:CDY30759.1	GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:GSBRNA2T00046173001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EE2DCE

Description

BnaC07g16590DBnaC07g16590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZY1]

Coordinates

chrLK032260:+:25638..27587

Molecular Weight (calculated)

43312.0 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.137

Length

410 amino acids

Sequence
(BLAST)

001: MSATALSRLN PISQIGFQVA AKSNKTFLSG AQRRLFSDSG RRLRGGAMTT SGSLPVFGDA CLDDLFTACA NNGLDFTKKP SATGGGVTFF TAASMRLGGK
101: REHFKNRLVC HYSSMDPLDK TPSLFGGFSK TIHTTSTVCF SAHELSTSQD SELSPTTTSL KCLKLVSGSY YLPHPEKEAT GGEDAHFICD EEQAIGVADG
201: VGGWAEVGVN AGLFSRELMS YSVAAIRELA KGSSIDPLMV LEKAHSQTRA QGSSTACIIA LTDKGLHAIN LGDSGFTVVR DGTTVFQSPV QQHGFNFTYQ
301: LGCGDSGGDM PHSGQVFMID VEAGDVIVAG TDGVYDNLYN EDITGVVVSS VRAGLDPKGT AQKIADLARA RAVDKKRQSP FATAAQEAGY RYYGGKLDDI
401: TALVSYVTPA

Best Arabidopsis Sequence Match ( AT5G66720.1 )
(BLAST)

001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS

Arabidopsis Description

Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.