CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89416
KRG93305
KRH03466
KRH09716
KRH11729
KRH16959
KRH23588
KRH24006
KRH27971
KRH29310
KRH36722
KRH44476
KRH47432
KRH50476
KRH53667
KRH54542
KRH56614
KRH56919
KRH63357
KRH64261
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66720.1	KRH09716	AT1G80040.1	21798944
AT5G66720.1	KRH23588	AT1G80040.1	21798944
AT5G66720.1	KRH44476	AT1G80040.1	21798944
AT5G66720.1	KRH47432	AT1G80040.1	21798944
AT5G66720.1	KRG93305	AT3G27960.1	21798944
AT5G66720.1	KRH56614	AT3G27960.1	21798944
AT5G66720.1	KRH03466	AT3G47620.1	21798944
AT5G66720.1	KRH54542	AT3G47620.1	21798944
AT5G66720.1	KRH56919	AT3G47620.1	21798944
AT5G66720.1	KRH63357	AT3G47620.1	21798944
AT5G66720.1	KRH24006	AT3G48150.1	21798944
AT5G66720.1	KRH27971	AT3G48150.1	21798944
AT5G66720.1	KRH29310	AT3G48150.1	21798944
AT5G66720.1	KRH77487	AT3G48150.1	21798944
AT5G66720.1	KRH16959	AT3G49580.1	21798944
AT5G66720.1	KRH53667	AT3G49580.1	21798944
AT5G66720.1	KRH64261	AT3G49580.1	21798944
AT5G66720.1	KRG89416	AT4G19700.1	21798944
AT5G66720.1	KRH11729	AT4G19700.1	21798944
AT5G66720.1	KRH36722	AT4G19700.1	21798944
AT5G66720.1	KRH50476	AT4G19700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69944	Soybean	cytosol, plastid	87.04	90.38
VIT_04s0023g01400.t01	Wine grape	plastid	64.81	64.64
KRH28642	Soybean	mitochondrion	64.81	57.92
AT5G66720.1	Thale cress	plastid	56.88	51.93
KRH76843	Soybean	plastid	60.58	51.93
CDY53852	Canola	plastid	54.76	50.61
Bra012095.1-P	Field mustard	plastid	53.97	49.88
CDY30759	Canola	plastid	53.17	49.02
KRH15248	Soybean	mitochondrion	60.32	45.06
KRH05793	Soybean	mitochondrion	59.79	44.66
EER90674	Sorghum	mitochondrion, plastid	51.85	42.06
Zm00001d013027_P002	Maize	mitochondrion	51.85	41.88
Zm00001d034575_P001	Maize	plastid	51.32	41.63
Os03t0809300-01	Rice	plastid	50.79	40.08
KRH30165	Soybean	cytosol	17.99	30.63
KRG98206	Soybean	cytosol	24.87	29.1
KRH10513	Soybean	mitochondrion, plastid	26.98	13.11

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100784475	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A0R0FQJ8
EMBL:ACUP02010161	EnsemblPlantsGene:GLYMA_16G141200	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH08301	ProteinID:KRH08301	ProteinID:KRH08301.1	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0003DE7DE1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:29911187..29916505

Molecular Weight (calculated)

40322.2 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.141

Length

378 amino acids

Sequence
(BLAST)

001: MAAPASNAVL LGDVHFDDVA AKPCGVHFRG ETRRGALRAT VNLRKPKTLS GILNFGCSTS DASWRSWNPS SLHRNSSFAC CSAETTPHVQ HLATSTFSID
101: QTNFGGERLK LFSGSCYLPH PDKEDTGGED AHFICTDEQA IGVADGVGGW ADVGVNAGLF ARELMSHSVR AIEEEPKNSI NPARVLEKAH SCTKAKGSST
201: ACIITLTDTG LHAINLGDSG FIVVRDGCTI FRSPVQQHGF NFTYQLESGN GGDLPSSGEV FTIPVAPGDV VVAGTDGLFD NLYNDEVTEV VLHSVRAGLE
301: PQVTAQKIAV LARQRALDRN RPTPFSTAAQ EAGFRYYGGK LDDITVVVSY ITGSTCDDWS QASVFVEVNE GFGMATMV

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.