Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH23588 Soybean nucleus, plastid 94.23 93.87
KRH44476 Soybean plastid 73.08 73.08
KRH47432 Soybean plastid 67.69 67.18
PGSC0003DMT400001668 Potato plastid 56.15 56.59
Solyc03g116780.2.1 Tomato plastid 56.15 56.15
PGSC0003DMT400073448 Potato plastid 53.46 52.85
KRH20146 Soybean nucleus 53.08 52.67
PGSC0003DMT400073696 Potato nucleus 50.38 51.57
VIT_09s0002g07130.t01 Wine grape nucleus, plastid 47.69 48.63
Solyc12g042750.1.1 Tomato nucleus, plastid 45.0 48.35
Os09t0119100-01 Rice nucleus, plastid 46.92 45.35
CDY70430 Canola plastid 41.54 44.08
CDY41114 Canola nucleus, plastid 37.31 43.89
AT1G80040.1 Thale cress nucleus, plastid 41.54 43.55
CDY37566 Canola nucleus, plastid 40.77 43.09
Bra008498.1-P Field mustard nucleus, plastid 40.77 43.09
Bra003546.1-P Field mustard plastid 40.38 42.86
CDX67941 Canola plastid 39.62 42.56
Os08t0313600-00 Rice nucleus 43.85 41.3
TraesCS5B01G159800.1 Wheat plastid 41.92 39.49
TraesCS5A01G162300.2 Wheat nucleus 40.77 38.55
HORVU5Hr1G050690.2 Barley plastid 40.0 37.82
TraesCS5D01G166600.1 Wheat nucleus 40.0 37.68
Solyc06g068190.1.1 Tomato cytosol, nucleus, peroxisome 19.23 34.97
Protein Annotations
Gene3D:1.10.8.10EntrezGene:100815998MapMan:35.2EMBL:ACUP02009107EMBL:BT096190UniProt:C6TF13
InterPro:CUEncoils:CoilEnsemblPlantsGene:GLYMA_15G007000GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR003892EnsemblPlants:KRH09716ProteinID:KRH09716ProteinID:KRH09716.1PFAM:PF02845PFscan:PS51140
PANTHER:PTHR31245PANTHER:PTHR31245:SF12SUPFAM:SSF46934InterPro:UBA-like_sfUniParc:UPI0001B16F00SEG:seg
Description
hypothetical protein
Coordinates
chr15:-:579095..582400
Molecular Weight (calculated)
28880.0 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.492
Length
260 amino acids
Sequence
(BLAST)
001: MSAAVCGSKR SLFEELPPSP PVSKRLRCSS SPIRLSLPSL IDHLRSLFPH MDDQVLERAL QECGNDLDAA IKSLHGLCLG SADDNSQIAP QPDLPNVVHT
101: GTLEENDDAS ASGDQPASGN FPADGAEWID LFVREMTCAT SVDDARSRAA RLLEVLEKSI TAHASSGATT ALQRENLMLK EQIEALTKEK NCFKSAFRIQ
201: LERLSDYENK NQELQQLKQL VSQYQEQIRT LEVNNYALRM HLNQAQQYNP FPGRFPPDAF
Best Arabidopsis Sequence Match ( AT5G32440.3 )
(BLAST)
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.