Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH44476 | Soybean | plastid | 83.59 | 84.23 |
| KRH09716 | Soybean | nucleus, plastid | 67.18 | 67.69 |
| KRH23588 | Soybean | nucleus, plastid | 66.41 | 66.67 |
| PGSC0003DMT400001668 | Potato | plastid | 52.67 | 53.49 |
| Solyc03g116780.2.1 | Tomato | plastid | 53.05 | 53.46 |
| PGSC0003DMT400073696 | Potato | nucleus | 48.09 | 49.61 |
| PGSC0003DMT400073448 | Potato | plastid | 49.24 | 49.05 |
| KRH20146 | Soybean | nucleus | 48.09 | 48.09 |
| VIT_09s0002g07130.t01 | Wine grape | nucleus, plastid | 45.8 | 47.06 |
| Solyc12g042750.1.1 | Tomato | nucleus, plastid | 41.6 | 45.04 |
| CDY41114 | Canola | nucleus, plastid | 35.11 | 41.63 |
| CDY70430 | Canola | plastid | 37.79 | 40.41 |
| AT1G80040.1 | Thale cress | nucleus, plastid | 37.79 | 39.92 |
| Os09t0119100-01 | Rice | nucleus, plastid | 40.84 | 39.78 |
| Bra003546.1-P | Field mustard | plastid | 37.02 | 39.59 |
| CDY37566 | Canola | nucleus, plastid | 37.02 | 39.43 |
| Bra008498.1-P | Field mustard | nucleus, plastid | 37.02 | 39.43 |
| CDX67941 | Canola | plastid | 35.88 | 38.84 |
| TraesCS5B01G159800.1 | Wheat | plastid | 38.55 | 36.59 |
| Solyc06g068190.1.1 | Tomato | cytosol, nucleus, peroxisome | 19.85 | 36.36 |
| TraesCS5A01G162300.2 | Wheat | nucleus | 37.4 | 35.64 |
| Os08t0313600-00 | Rice | nucleus | 37.4 | 35.51 |
| TraesCS5D01G166600.1 | Wheat | nucleus | 37.02 | 35.14 |
| HORVU5Hr1G050690.2 | Barley | plastid | 36.26 | 34.55 |
Protein Annotations
| EMBL:ACUP02004150 | EnsemblPlants:KRH47432 | EnsemblPlantsGene:GLYMA_07G029500 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR31245 |
| PANTHER:PTHR31245:SF12 | PFAM:PF02845 | PFscan:PS51140 | ProteinID:KRH47432 | ProteinID:KRH47432.1 | ProteinID:KRH47433.1 |
| SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00023C7EC4 | UniProt:I1KH00 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr7:-:2357317..2361650
Molecular Weight (calculated)
29334.0 Da
IEP (calculated)
4.448
GRAVY (calculated)
-0.350
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAVCGSKR SFFEELPPSP PLSKRLRCSS SPIRFPPPSS IDQLRPLFPH MDDLVLERAL QECGNDIDAA IKRLNELCLG TADGNGIAEE SEVVINLGAG
101: KLEGDGNASV SEEQPALNNH LPADGAEWID FFVREMMVAT SVDDARARAA RMLEVLEKSI SERAKAEATD ALQKENLMLK EQIEALIKEK NSFKNAFRIQ
201: HERFADYEVK NQELQHLKQL VSQYQEQIRT LEEEIEGKDM MSLLTMVIME IVVIPEPDAF GY
101: KLEGDGNASV SEEQPALNNH LPADGAEWID FFVREMMVAT SVDDARARAA RMLEVLEKSI SERAKAEATD ALQKENLMLK EQIEALIKEK NSFKNAFRIQ
201: HERFADYEVK NQELQHLKQL VSQYQEQIRT LEEEIEGKDM MSLLTMVIME IVVIPEPDAF GY
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQKL LYRKTVY
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQKL LYRKTVY
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.