Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G159800.1 | Wheat | plastid | 64.31 | 62.68 |
| TraesCS5A01G162300.2 | Wheat | nucleus | 63.94 | 62.55 |
| HORVU5Hr1G050690.2 | Barley | plastid | 63.94 | 62.55 |
| TraesCS5D01G166600.1 | Wheat | nucleus | 62.08 | 60.51 |
| CDY44312 | Canola | nucleus | 18.96 | 54.26 |
| Solyc03g116780.2.1 | Tomato | plastid | 49.07 | 50.77 |
| PGSC0003DMT400001668 | Potato | plastid | 48.33 | 50.39 |
| Os08t0313600-00 | Rice | nucleus | 51.67 | 50.36 |
| VIT_11s0016g05730.t01 | Wine grape | plastid | 52.04 | 49.47 |
| PGSC0003DMT400073448 | Potato | plastid | 48.33 | 49.43 |
| KRH23588 | Soybean | nucleus, plastid | 46.47 | 47.89 |
| KRH09716 | Soybean | nucleus, plastid | 45.35 | 46.92 |
| VIT_09s0002g07130.t01 | Wine grape | nucleus, plastid | 44.24 | 46.67 |
| KRH44476 | Soybean | plastid | 44.98 | 46.54 |
| Os02t0184500-01 | Rice | cytosol | 36.43 | 46.23 |
| Bra030141.1-P | Field mustard | nucleus | 32.71 | 45.83 |
| Os06t0642900-01 | Rice | nucleus, plastid | 46.84 | 45.82 |
| KRH20146 | Soybean | nucleus | 44.24 | 45.42 |
| CDY35306 | Canola | plastid | 43.87 | 45.38 |
| Solyc07g007960.2.1 | Tomato | plastid | 44.61 | 45.28 |
| CDX90191 | Canola | plastid | 43.87 | 45.04 |
| CDY26987 | Canola | cytosol | 15.99 | 44.79 |
| PGSC0003DMT400079410 | Potato | plastid | 44.24 | 44.74 |
| CDX94671 | Canola | plastid | 41.64 | 44.44 |
| Bra010829.1-P | Field mustard | plastid | 43.12 | 44.11 |
| CDX99829 | Canola | plastid | 40.89 | 44.0 |
| CDY48340 | Canola | plastid | 39.78 | 43.5 |
| Bra032320.1-P | Field mustard | plastid | 39.78 | 43.5 |
| AT5G32440.3 | Thale cress | plastid | 42.38 | 43.02 |
| Solyc12g042750.1.1 | Tomato | nucleus, plastid | 38.66 | 42.98 |
| PGSC0003DMT400073696 | Potato | nucleus | 40.15 | 42.52 |
| Solyc12g009620.1.1 | Tomato | plastid | 43.87 | 41.99 |
| PGSC0003DMT400007542 | Potato | plastid | 43.12 | 41.28 |
| CDY70430 | Canola | plastid | 37.55 | 41.22 |
| AT1G80040.1 | Thale cress | nucleus, plastid | 37.92 | 41.13 |
| KRH47432 | Soybean | plastid | 39.78 | 40.84 |
| Bra003546.1-P | Field mustard | plastid | 37.17 | 40.82 |
| CDX67941 | Canola | plastid | 36.06 | 40.08 |
| Solyc06g068190.1.1 | Tomato | cytosol, nucleus, peroxisome | 21.19 | 39.86 |
| CDY41114 | Canola | nucleus, plastid | 32.71 | 39.82 |
| CDY37566 | Canola | nucleus, plastid | 35.32 | 38.62 |
| Bra008498.1-P | Field mustard | nucleus, plastid | 34.94 | 38.21 |
| Os06t0642650-01 | Rice | mitochondrion | 24.91 | 25.28 |
Protein Annotations
| EMBL:AK102931 | EnsemblPlants:Os09t0119100-01 | EnsemblPlantsGene:Os09g0119100 | EntrezGene:4346417 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF3 | ProteinID:BAF24505.1 |
| ProteinID:BAT06867.1 | RefSeq:XP_015651207.1 | SUPFAM:SSF46934 | UniParc:UPI0000DD9614 | UniProt:Q0J3G0 | MapMan:35.2 |
Description
UBA-like domain containing protein. (Os09t0119100-01)
Coordinates
chr9:-:1464329..1470406
Molecular Weight (calculated)
29690.9 Da
IEP (calculated)
5.368
GRAVY (calculated)
-0.438
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAVCGKRA SSFFEDLPHS PSSPPSKRAC FRGGSSPSRP LADPALVAQI RPRFPSVGLE VIENALEECE NDFDSAIKFL FNLHVGPTEC NVDPIYQSPS
101: GMSTELQVAD EGILAGNEAA VPIGNAPCAD NFPSSSTQWV EILVNEMTNA SNMDDAKARA SRVLEVFEKS MTAHVGAMGS FQKESSVYKE QFEAITRENT
201: ILKKAVAIQH ERQKEHDGRN QEIQQLKQLV AQYQEQIRSL EVNNYALSMH LRQAQQANSI PGHFHRDIF
101: GMSTELQVAD EGILAGNEAA VPIGNAPCAD NFPSSSTQWV EILVNEMTNA SNMDDAKARA SRVLEVFEKS MTAHVGAMGS FQKESSVYKE QFEAITRENT
201: ILKKAVAIQH ERQKEHDGRN QEIQQLKQLV AQYQEQIRSL EVNNYALSMH LRQAQQANSI PGHFHRDIF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.