Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0119100-01 | Rice | nucleus, plastid | 50.36 | 51.67 |
| CDY44312 | Canola | nucleus | 16.67 | 48.94 |
| Solyc03g116780.2.1 | Tomato | plastid | 44.93 | 47.69 |
| PGSC0003DMT400001668 | Potato | plastid | 44.57 | 47.67 |
| PGSC0003DMT400079410 | Potato | plastid | 44.57 | 46.24 |
| PGSC0003DMT400073448 | Potato | plastid | 43.84 | 46.01 |
| KRH20146 | Soybean | nucleus | 43.12 | 45.42 |
| Solyc07g007960.2.1 | Tomato | plastid | 43.48 | 45.28 |
| PGSC0003DMT400073696 | Potato | nucleus | 41.3 | 44.88 |
| VIT_11s0016g05730.t01 | Wine grape | plastid | 46.01 | 44.88 |
| Bra030141.1-P | Field mustard | nucleus | 30.8 | 44.27 |
| Os02t0184500-01 | Rice | cytosol | 33.7 | 43.87 |
| KRH09716 | Soybean | nucleus, plastid | 41.3 | 43.85 |
| VIT_09s0002g07130.t01 | Wine grape | nucleus, plastid | 39.86 | 43.14 |
| KRH23588 | Soybean | nucleus, plastid | 40.58 | 42.91 |
| Os06t0642900-01 | Rice | nucleus, plastid | 42.75 | 42.91 |
| Solyc12g042750.1.1 | Tomato | nucleus, plastid | 37.32 | 42.56 |
| CDX94671 | Canola | plastid | 38.77 | 42.46 |
| CDX99829 | Canola | plastid | 38.04 | 42.0 |
| KRH44476 | Soybean | plastid | 39.49 | 41.92 |
| CDY35306 | Canola | plastid | 39.49 | 41.92 |
| CDY41114 | Canola | nucleus, plastid | 33.33 | 41.63 |
| CDX90191 | Canola | plastid | 39.49 | 41.6 |
| CDY48340 | Canola | plastid | 36.96 | 41.46 |
| Bra032320.1-P | Field mustard | plastid | 36.96 | 41.46 |
| CDX67941 | Canola | plastid | 36.23 | 41.32 |
| PGSC0003DMT400007542 | Potato | plastid | 41.67 | 40.93 |
| Solyc12g009620.1.1 | Tomato | plastid | 41.3 | 40.57 |
| AT5G32440.3 | Thale cress | plastid | 38.77 | 40.38 |
| AT1G80040.1 | Thale cress | nucleus, plastid | 36.23 | 40.32 |
| Bra010829.1-P | Field mustard | plastid | 38.41 | 40.3 |
| Bra003546.1-P | Field mustard | plastid | 35.51 | 40.0 |
| CDY70430 | Canola | plastid | 35.51 | 40.0 |
| CDY37566 | Canola | nucleus, plastid | 34.78 | 39.02 |
| Bra008498.1-P | Field mustard | nucleus, plastid | 34.42 | 38.62 |
| KRH47432 | Soybean | plastid | 35.51 | 37.4 |
| CDY26987 | Canola | cytosol | 12.68 | 36.46 |
| Os06t0642650-01 | Rice | mitochondrion | 31.52 | 32.83 |
| Solyc06g068190.1.1 | Tomato | cytosol, nucleus, peroxisome | 16.67 | 32.17 |
Protein Annotations
| EnsemblPlants:Os08t0313600-00 | EnsemblPlantsGene:Os08g0313600 | EntrezGene:9272364 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF3 | ProteinID:BAT04849.1 |
| RefSeq:XP_015648295.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI000393B202 | UniProt:A0A0P0XE80 | MapMan:35.2 |
Description
Cen8.t00960Ubiquitin system component Cue domain containing protein. (Os08t0313600-00)
Coordinates
chr8:-:13392644..13398752
Molecular Weight (calculated)
30485.7 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.601
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAVVCGKRA SSSFFEDLTH PTGGSPPAAK RTRCGGAFFP PPPPPTWPRG VTKNDLVARL STQFPAMSLE MIEKALDKSG NNVDSAIRSL LNLHLESVQN
101: NSGVAFEPIQ ETTEVQVSAE DGNEIGAPSE SAPCPENFPS NGSEWVELLV NEMTTASNMD DAKSRATRVL EAFEKAVVSH VNAQGPHDFQ KENAVLKGQM
201: ESLTRENTIL KRAFAIQHER QDYDAKNQEL QDEKQRIAEF QEQVRNLELN NYRLSMLLRQ AQQGSSIPGR FNPDVF
101: NSGVAFEPIQ ETTEVQVSAE DGNEIGAPSE SAPCPENFPS NGSEWVELLV NEMTTASNMD DAKSRATRVL EAFEKAVVSH VNAQGPHDFQ KENAVLKGQM
201: ESLTRENTIL KRAFAIQHER QDYDAKNQEL QDEKQRIAEF QEQVRNLELN NYRLSMLLRQ AQQGSSIPGR FNPDVF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.