Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26987 | Canola | cytosol | 75.53 | 73.96 |
| Bra030141.1-P | Field mustard | nucleus | 97.87 | 47.92 |
| CDX94671 | Canola | plastid | 96.81 | 36.11 |
| CDX99829 | Canola | plastid | 91.49 | 34.4 |
| CDY48340 | Canola | plastid | 89.36 | 34.15 |
| CDX90191 | Canola | plastid | 89.36 | 32.06 |
| CDY35306 | Canola | plastid | 88.3 | 31.92 |
| AT5G32440.3 | Thale cress | plastid | 86.17 | 30.57 |
| KRH20146 | Soybean | nucleus | 67.02 | 24.05 |
| Solyc07g007960.2.1 | Tomato | plastid | 64.89 | 23.02 |
| PGSC0003DMT400079410 | Potato | plastid | 64.89 | 22.93 |
| Solyc12g009620.1.1 | Tomato | plastid | 67.02 | 22.42 |
| PGSC0003DMT400007542 | Potato | plastid | 67.02 | 22.42 |
| VIT_11s0016g05730.t01 | Wine grape | plastid | 65.96 | 21.91 |
| CDY41114 | Canola | nucleus, plastid | 44.68 | 19.0 |
| Os09t0119100-01 | Rice | nucleus, plastid | 54.26 | 18.96 |
| CDX67941 | Canola | plastid | 46.81 | 18.18 |
| CDY70430 | Canola | plastid | 46.81 | 17.96 |
| TraesCS5A01G162300.2 | Wheat | nucleus | 50.0 | 17.09 |
| CDY37566 | Canola | nucleus, plastid | 44.68 | 17.07 |
| TraesCS5B01G159800.1 | Wheat | plastid | 50.0 | 17.03 |
| TraesCS5D01G166600.1 | Wheat | nucleus | 50.0 | 17.03 |
| Os08t0313600-00 | Rice | nucleus | 48.94 | 16.67 |
| HORVU5Hr1G050690.2 | Barley | plastid | 47.87 | 16.36 |
Protein Annotations
| EnsemblPlants:CDY44312 | EnsemblPlantsGene:GSBRNA2T00079947001 | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF1 | ProteinID:CDY44312 |
| ProteinID:CDY44312.1 | UniParc:UPI0004EE8DFC | UniProt:A0A078I2N6 | MapMan:35.2 | : | : |
Description
BnaA07g07960DBnaA07g07960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2N6]
Coordinates
chrLK032585:-:221622..222002
Molecular Weight (calculated)
10985.0 Da
IEP (calculated)
7.696
GRAVY (calculated)
-0.924
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MQSSLQQENS MLKQQLEATV QENSLLKRAV VTQQKRQRET EDQSQELQGL RQMVSQYQEQ LRTLEVNNYA LTLHLKQALQ NNSSIPGRFH PDVF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.