Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G028290.2 | Barley | cytosol | 61.32 | 73.86 |
| EES04652 | Sorghum | plastid | 80.19 | 61.37 |
| Zm00001d015571_P001 | Maize | plastid | 79.25 | 60.65 |
| TraesCS6B01G172800.1 | Wheat | nucleus, plastid | 77.36 | 58.78 |
| TraesCS6A01G144700.3 | Wheat | nucleus, plastid | 78.3 | 57.64 |
| TraesCS6D01G133600.4 | Wheat | nucleus, plastid | 77.83 | 57.29 |
| Os06t0642900-01 | Rice | nucleus, plastid | 71.23 | 54.91 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 61.79 | 46.45 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 61.79 | 45.49 |
| Os09t0119100-01 | Rice | nucleus, plastid | 46.23 | 36.43 |
| Os08t0313600-00 | Rice | nucleus | 43.87 | 33.7 |
| Os06t0642650-01 | Rice | mitochondrion | 33.02 | 26.42 |
Protein Annotations
| EnsemblPlants:Os02t0184500-01 | EnsemblPlantsGene:Os02g0184500 | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF7 | ProteinID:BAF08023.1 |
| ProteinID:BAS77337.1 | SEG:seg | UniParc:UPI0000DF05AF | UniProt:Q0E3B5 | MapMan:35.2 | : |
Description
Similar to CUE domain containing protein. (Os02t0184500-01)
Coordinates
chr2:+:4717699..4720607
Molecular Weight (calculated)
23874.2 Da
IEP (calculated)
5.019
GRAVY (calculated)
-0.493
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPQLLERAL EASGDDIDSA IKSLNELCLE SAAVGDSNSV LPAALKLSAE GVVNNGHLDV LTENPHATEN FQTNHHGSEW VELFVREMMS ASDIDDARAR
101: ASRALEALEK SIMERAGTEA VHNLHKENVM LKEQLAIYLR ENAVLKRAVA IQHERQKEFD ERTQEVHSLK QLVLQYQEQI KTLEINNYAL RVHLKQAQQN
201: NSMPGRFPPD VF
101: ASRALEALEK SIMERAGTEA VHNLHKENVM LKEQLAIYLR ENAVLKRAVA IQHERQKEFD ERTQEVHSLK QLVLQYQEQI KTLEINNYAL RVHLKQAQQN
201: NSMPGRFPPD VF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.