Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04652 | Sorghum | plastid | 87.36 | 87.36 |
| Os02t0184500-01 | Rice | cytosol | 60.65 | 79.25 |
| HORVU6Hr1G028290.2 | Barley | cytosol | 45.49 | 71.59 |
| TraesCS6B01G172800.1 | Wheat | nucleus, plastid | 71.48 | 70.97 |
| TraesCS6A01G144700.3 | Wheat | nucleus, plastid | 71.48 | 68.75 |
| TraesCS6D01G133600.4 | Wheat | nucleus, plastid | 71.48 | 68.75 |
| Zm00001d046602_P001 | Maize | plastid | 67.87 | 66.9 |
| Zm00001d036760_P001 | Maize | plastid | 64.62 | 63.48 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 53.07 | 52.13 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 54.15 | 52.08 |
| Zm00001d036761_P001 | Maize | cytosol | 28.88 | 29.41 |
Protein Annotations
| EnsemblPlants:Zm00001d015571_P001 | EnsemblPlants:Zm00001d015571_T001 | EnsemblPlantsGene:Zm00001d015571 | EntrezGene:100282112 | Gene3D:1.10.8.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | ncoils:Coil |
| PANTHER:PTHR31245 | PANTHER:PTHR31245:SF7 | PFAM:PF02845 | PFscan:PS51140 | ProteinID:AQK69136.1 | ProteinID:AQK69137.1 |
| SEG:seg | SUPFAM:SSF46934 | UniParc:UPI0002210BEB | UniProt:A0A1D6H2S4 | MapMan:35.2 | : |
Description
Ubiquitin system component Cue protein
Coordinates
chr5:+:98866461..98875915
Molecular Weight (calculated)
30943.6 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.502
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAVVCGKRS SSIFGDELVP SPSSPPSPSH HHHPAKRARC SPSRWREGLL HHLLTLFPDM DPQLLEKALE ASGDDLDSAI KRLNELRLES AGAILSATVC
101: ESEKDISSAH NLLAEGTTSN GHLDIATENP PAIDNSQTSH HSSEWVDLFV KEMMSSSDID DARARASRAL EVFEKSIMDR VGPEAVQNLH RENVMLKEQL
201: AIILRENAVL KRGVAIQHER QKEFDVRTQE VDSLKQLVLQ YQEQIKTLEI NNYALRVHLK QAQQGNSMHG RFPPDVF
101: ESEKDISSAH NLLAEGTTSN GHLDIATENP PAIDNSQTSH HSSEWVDLFV KEMMSSSDID DARARASRAL EVFEKSIMDR VGPEAVQNLH RENVMLKEQL
201: AIILRENAVL KRGVAIQHER QKEFDVRTQE VDSLKQLVLQ YQEQIKTLEI NNYALRVHLK QAQQGNSMHG RFPPDVF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.