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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
  • plastid 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G133600.4 Wheat nucleus, plastid 98.57 95.49
TraesCS6A01G144700.3 Wheat nucleus, plastid 97.13 94.1
HORVU6Hr1G028290.2 Barley cytosol 56.27 89.2
Os02t0184500-01 Rice cytosol 58.78 77.36
Zm00001d015571_P001 Maize plastid 70.97 71.48
EES04652 Sorghum plastid 69.89 70.4
TraesCS7B01G438200.1 Wheat plastid 58.78 57.95
GSMUA_Achr4P20300_001 Banana nucleus, plastid 58.06 56.25
GSMUA_Achr7P05400_001 Banana nucleus, plastid 55.91 55.32
TraesCS5B01G159800.1 Wheat plastid 40.14 40.58
TraesCS7B01G438300.1 Wheat cytosol 33.33 36.61
TraesCS7B01G438800.1 Wheat cytosol 32.26 35.29
TraesCS5B01G501600.1 Wheat cytosol 20.79 32.58
TraesCS5B01G495600.1 Wheat cytosol 20.43 32.39
TraesCS3B01G495900.1 Wheat cytosol 19.0 30.29
TraesCS2B01G510600.2 Wheat plastid 18.28 21.07
Protein Annotations
EnsemblPlants:TraesCS6B01G172800.1EnsemblPlantsGene:TraesCS6B01G172800Gene3D:1.10.8.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:CUEInterPro:IPR003892InterPro:UBA-like_sfncoils:CoilPANTHER:PTHR31245PANTHER:PTHR31245:SF7
PFAM:PF02845PFscan:PS51140SEG:segSUPFAM:SSF46934TIGR:cd14279MapMan:35.2
Description
No Description!
Coordinates
chr6B:-:185657481..185662808
Molecular Weight (calculated)
31099.8 Da
IEP (calculated)
6.392
GRAVY (calculated)
-0.538
Length
279 amino acids
Sequence
(BLAST)
001: MSAVVCGKRS SIFADELIPS SPPSPPHHHP SKRARCSPAR AFDDAAAAHR REALLHHLRS LFPHMDPQLL ERALEASGDD LDFAIRSLND LRLESAEAIF
101: SAAVGEPENG LSTALKLTAE GNGQLDAISG NPPATDNCQT NHHSSEWVEL FVREMMSASD INDARARASR ALEVIEKSIM ERTGAEAVQN LHKENTMLKE
201: QLAIALRENA VLKRGVAIQH ERQKEFDDKT QEVHNLKQLI LQYQEQLKTL EINNYALRMH LQQAQQNSSM PGRFHPDVC
Best Arabidopsis Sequence Match ( AT5G32440.1 )
(BLAST)
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.