Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G482500.1 | Wheat | cytosol, mitochondrion, nucleus | 85.8 | 86.29 |
| TraesCS5B01G501600.1 | Wheat | cytosol | 68.18 | 67.42 |
| OQU87149 | Sorghum | cytosol, mitochondrion, nucleus | 35.23 | 33.33 |
| TraesCS5B01G159800.1 | Wheat | plastid | 35.23 | 22.46 |
| TraesCS7B01G438200.1 | Wheat | plastid | 33.52 | 20.85 |
| TraesCS6B01G172800.1 | Wheat | nucleus, plastid | 32.39 | 20.43 |
| TraesCS7B01G438300.1 | Wheat | cytosol | 25.0 | 17.32 |
| TraesCS7B01G438800.1 | Wheat | cytosol | 23.86 | 16.47 |
| TraesCS3B01G495900.1 | Wheat | cytosol | 10.23 | 10.29 |
| TraesCS2B01G510600.2 | Wheat | plastid | 11.36 | 8.26 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G495600.1 | EnsemblPlantsGene:TraesCS5B01G495600 | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF3 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:662982375..662983089
Molecular Weight (calculated)
19175.6 Da
IEP (calculated)
5.094
GRAVY (calculated)
-0.502
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTDDFQAVL ERLLQLRLDC PPDGDGASAP QDAPAQPAAA ADDDHAVVKQ SAAEWTEVLV GEMASAASMD DARRRAAKIL EAFGGAVCAR AARVVGDKDR
101: ELENVRRQNI ILKKAVLLQH RQHVEDEAKG RELQGQVAQH REQVRQLEAD KYVLSMHLRN AGGGASMPGN FNPEVF
101: ELENVRRQNI ILKKAVLLQH RQHVEDEAKG RELQGQVAQH REQVRQLEAD KYVLSMHLRN AGGGASMPGN FNPEVF
001: MKSLYSFASS EEKKAEELAA GGAATQETDA VCGGNPPTSG DDWVELLVRE VLQSSGTDDA KVRAARVLEA LEKMLSARAR EEAGNKFQEE KVAVQQQVET
101: LVKDNTVLKR AVAIQHERQK ALEDANHQLG LLKQLVPQYQ EKLRNLEVNN YALRMQLQQV EHGNSMPARF NPDVF
101: LVKDNTVLKR AVAIQHERQK ALEDANHQLG LLKQLVPQYQ EKLRNLEVNN YALRMQLQQV EHGNSMPARF NPDVF
Arabidopsis Description
F18B13.13 protein [Source:UniProtKB/TrEMBL;Acc:Q9SSD3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.