Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G438800.1 | Wheat | cytosol | 58.49 | 60.78 |
| TraesCS7D01G511100.1 | Wheat | cytosol, mitochondrion, nucleus | 58.11 | 60.39 |
| TraesCS7A01G521600.1 | Wheat | cytosol | 58.11 | 59.92 |
| TraesCS7B01G438300.1 | Wheat | cytosol | 53.96 | 56.3 |
| HORVU0Hr1G022480.3 | Barley | cytosol | 45.28 | 54.05 |
| TraesCS3B01G495900.1 | Wheat | cytosol | 34.72 | 52.57 |
| TraesCS2D01G174900.1 | Wheat | cytosol | 21.13 | 50.91 |
| TraesCS4D01G164300.2 | Wheat | cytosol | 36.23 | 50.79 |
| TraesCS2D01G241500.1 | Wheat | cytosol | 36.23 | 50.79 |
| EER88702 | Sorghum | plastid | 52.08 | 50.55 |
| HORVU0Hr1G022570.1 | Barley | nucleus | 58.49 | 50.0 |
| TraesCS2D01G471100.1 | Wheat | cytosol | 25.66 | 50.0 |
| Zm00001d036761_P001 | Maize | cytosol | 50.94 | 49.63 |
| TraesCS4A01G162800.1 | Wheat | cytosol | 34.34 | 48.15 |
| TraesCS6A01G294400.1 | Wheat | cytosol | 34.34 | 48.15 |
| Os02t0184500-01 | Rice | cytosol | 26.42 | 33.02 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 34.72 | 31.94 |
| Os06t0642900-01 | Rice | nucleus, plastid | 32.83 | 31.64 |
| Os08t0313600-00 | Rice | nucleus | 32.83 | 31.52 |
| TraesCS2B01G510600.2 | Wheat | plastid | 28.68 | 31.41 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 32.45 | 30.5 |
| Os09t0119100-01 | Rice | nucleus, plastid | 25.28 | 24.91 |
Protein Annotations
| EnsemblPlants:Os06t0642650-01 | EnsemblPlantsGene:Os06g0642650 | EntrezGene:4341634 | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF2 | ProteinID:BAD37361.1 |
| ProteinID:BAS98824.1 | ProteinID:EEE66095.1 | RefSeq:XP_015643929.1 | SEG:seg | UniParc:UPI0000426274 | UniProt:Q67WV8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical conserved gene. (Os06t0642650-01)
Coordinates
chr6:-:26162546..26164599
Molecular Weight (calculated)
29320.0 Da
IEP (calculated)
6.587
GRAVY (calculated)
-0.291
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATVAAASS RKRGFSVADI LDDPFPLPSH HLAKRGRCSS SAASAADLGV SLEFDPIEVL QLIFPHEDPQ LLKSFFEASG NVLDAAIRGF KHRLQSHTDT
101: EITEAASGDT GNEVVSPKVE SDLSAMNIPS NGSEWAELVV KEMSSALDLV DAKNRAFRLL DLFEKSTAAC ISPVEMRKMR EEHKILKLML GGLLEQNGVL
201: KRAFLKQHNR LNDYEKKMSQ ERSQIIDTYE KEIKALQHRN YVLSLHLAQA TQHGIISGHC NPDVF
101: EITEAASGDT GNEVVSPKVE SDLSAMNIPS NGSEWAELVV KEMSSALDLV DAKNRAFRLL DLFEKSTAAC ISPVEMRKMR EEHKILKLML GGLLEQNGVL
201: KRAFLKQHNR LNDYEKKMSQ ERSQIIDTYE KEIKALQHRN YVLSLHLAQA TQHGIISGHC NPDVF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.