Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G438800.1 | Wheat | cytosol | 92.55 | 92.55 |
| TraesCS7A01G521600.1 | Wheat | cytosol | 88.63 | 87.94 |
| HORVU0Hr1G022570.1 | Barley | nucleus | 87.84 | 72.26 |
| TraesCS2D01G174900.1 | Wheat | cytosol | 27.06 | 62.73 |
| TraesCS2D01G471100.1 | Wheat | cytosol | 33.33 | 62.5 |
| TraesCS4D01G164300.2 | Wheat | cytosol | 45.88 | 61.9 |
| TraesCS2D01G241500.1 | Wheat | cytosol | 45.1 | 60.85 |
| Os06t0642650-01 | Rice | mitochondrion | 60.39 | 58.11 |
| EER88702 | Sorghum | plastid | 59.22 | 55.31 |
| Zm00001d036761_P001 | Maize | cytosol | 57.65 | 54.04 |
| TraesCS6D01G133600.4 | Wheat | nucleus, plastid | 34.51 | 30.56 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 33.33 | 30.14 |
| TraesCS7D01G510900.1 | Wheat | nucleus, plastid | 33.33 | 30.04 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 33.73 | 29.86 |
| TraesCS5D01G166600.1 | Wheat | nucleus | 28.63 | 26.45 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G511100.1 | EnsemblPlantsGene:TraesCS7D01G511100 | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF2 | SEG:seg |
| TIGR:cd14279 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:613634446..613638399
Molecular Weight (calculated)
28170.6 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.357
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAKVAGCRK RGAEAFMEDP FAALPPLNTK RGRCSPSAAA DVAELGVSME FDPVDALQLI FPGADPQLLR GYFEASGNVL DAAIRGFKDY LASGSALTNA
101: DAASSGVASD VLEMNARTNS IDWAELIVRE MSAASDLIDA KSRAFRILEL FDKSAAGCNT PDEKQKMREE HKILKQMLGG LLHQNGVLKR AFLIQHNRLK
201: DYQDMVRERS QFKEIVDKYQ QQIKALEDRN YVLSLHLAQS DHRSGISGHR NPDVF
101: DAASSGVASD VLEMNARTNS IDWAELIVRE MSAASDLIDA KSRAFRILEL FDKSAAGCNT PDEKQKMREE HKILKQMLGG LLHQNGVLKR AFLIQHNRLK
201: DYQDMVRERS QFKEIVDKYQ QQIKALEDRN YVLSLHLAQS DHRSGISGHR NPDVF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQEN MMLKQQLEAI VQENSLLKRA
201: VVTQQKRQRE SEDQSQELQH LRQLVTQYQE QLRTLEVNNY ALTLHLKQAQ QNSSIPGRYH PDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.