Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036761_P001 | Maize | cytosol | 82.78 | 83.09 |
| TraesCS7B01G438800.1 | Wheat | cytosol | 56.78 | 60.78 |
| TraesCS7D01G511100.1 | Wheat | cytosol, mitochondrion, nucleus | 55.31 | 59.22 |
| TraesCS7A01G521600.1 | Wheat | cytosol | 55.68 | 59.14 |
| TraesCS7B01G438300.1 | Wheat | cytosol | 53.48 | 57.48 |
| Os06t0642650-01 | Rice | mitochondrion | 50.55 | 52.08 |
| HORVU0Hr1G022480.3 | Barley | cytosol | 41.76 | 51.35 |
| HORVU0Hr1G022570.1 | Barley | nucleus | 57.14 | 50.32 |
| TraesCS2D01G174900.1 | Wheat | cytosol | 19.78 | 49.09 |
| TraesCS3B01G495900.1 | Wheat | cytosol | 31.14 | 48.57 |
| TraesCS2D01G471100.1 | Wheat | cytosol | 23.08 | 46.32 |
| TraesCS4D01G164300.2 | Wheat | cytosol | 31.87 | 46.03 |
| TraesCS2D01G241500.1 | Wheat | cytosol | 31.5 | 45.5 |
| TraesCS6A01G294400.1 | Wheat | cytosol | 31.5 | 45.5 |
| TraesCS4A01G162800.1 | Wheat | cytosol | 31.14 | 44.97 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 34.07 | 32.29 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 32.23 | 31.21 |
| EER90099 | Sorghum | plastid | 30.77 | 29.47 |
| EES04652 | Sorghum | plastid | 29.67 | 29.24 |
| TraesCS2B01G510600.2 | Wheat | plastid | 24.91 | 28.1 |
| OQU87149 | Sorghum | cytosol, mitochondrion, nucleus | 16.48 | 24.19 |
Protein Annotations
| EnsemblPlants:EER88702 | EnsemblPlantsGene:SORBI_3010G204100 | EntrezGene:8067703 | ncoils:Coil | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF2 |
| ProteinID:EER88702 | ProteinID:EER88702.1 | RefSeq:XP_002437335.1 | UniParc:UPI0001A89548 | UniProt:C5Z6N2 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr10:+:54641353..54643476
Molecular Weight (calculated)
30578.1 Da
IEP (calculated)
6.405
GRAVY (calculated)
-0.450
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAVAASR KKRGTAAAFL DDPFSFPAAD LPLLQTKRGR CSSSIVAADL GLSFPLEFDP VEALHLIFPG EDPQVLQNYL QASGNVLDAA IRAYKDYLAE
101: RNTESASAIN HVPSDNEEGD SILSESDVDL TVETIPTNCS GWAELIVKEM SSASDLTDAK NRAFKILNLL EKSAARSSPD EKSKLNKEHK IVKQMLGFLL
201: HQNGVLKRAF LIQHNRLKEY QEMVQERSQF NQILEKYQKQ IKALEEKNNA LSFHLQNANQ CRNTYWHRNP DVF
101: RNTESASAIN HVPSDNEEGD SILSESDVDL TVETIPTNCS GWAELIVKEM SSASDLTDAK NRAFKILNLL EKSAARSSPD EKSKLNKEHK IVKQMLGFLL
201: HQNGVLKRAF LIQHNRLKEY QEMVQERSQF NQILEKYQKQ IKALEEKNNA LSFHLQNANQ CRNTYWHRNP DVF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.