Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G495900.1 | Wheat | cytosol | 82.01 | 88.57 |
| TraesCS2D01G471100.1 | Wheat | cytosol | 61.38 | 85.29 |
| TraesCS4A01G162800.1 | Wheat | cytosol | 85.19 | 85.19 |
| TraesCS2D01G174900.1 | Wheat | cytosol | 48.15 | 82.73 |
| HORVU0Hr1G022480.3 | Barley | cytosol | 55.03 | 46.85 |
| TraesCS7A01G521600.1 | Wheat | cytosol | 58.2 | 42.8 |
| Os06t0642650-01 | Rice | mitochondrion | 48.15 | 34.34 |
| EER88702 | Sorghum | plastid | 45.5 | 31.5 |
| Zm00001d036761_P001 | Maize | cytosol | 44.44 | 30.88 |
| TraesCS6A01G144700.3 | Wheat | nucleus, plastid | 30.69 | 20.14 |
| TraesCS7A01G521400.1 | Wheat | nucleus, plastid | 28.57 | 19.15 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 28.04 | 18.4 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 26.98 | 18.09 |
| TraesCS5A01G162300.2 | Wheat | nucleus | 21.16 | 14.55 |
| TraesCS5A01G482500.1 | Wheat | cytosol, mitochondrion, nucleus | 12.7 | 13.71 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G294400.1 | EnsemblPlantsGene:TraesCS6A01G294400 | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF2 | SEG:seg | TIGR:cd14279 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:526161426..526164842
Molecular Weight (calculated)
20045.3 Da
IEP (calculated)
5.070
GRAVY (calculated)
-0.421
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEVDGTRK RGAAAFLDDP FEVLQVKRGR CSPSATTASV ADLGINMEFD PVEAVQSVFP GADPQLLRGY LEASGNVLDA AIRSLSDYLA SDSATTNAGA
101: SSSGVASHVT VMNTPANRTE WTELIVKEMS SASDPNDARN RVFRIHEMFD KCAANCSTHD EAHKMRETKG TTDGAGGKVS SCGDKRGKE
101: SSSGVASHVT VMNTPANRTE WTELIVKEMS SASDPNDARN RVFRIHEMFD KCAANCSTHD EAHKMRETKG TTDGAGGKVS SCGDKRGKE
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQKL LYRKTVY
101: SPVVIQEPNV EPQQQGSAKE EPNVLNLDGT EWVELFVREM MNASDMKDAK ARAARALEAL EKSINARTGT DAMQNLQQKL LYRKTVY
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.