Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012095.1-P | Field mustard | plastid | 78.26 | 79.22 |
| CDY53852 | Canola | plastid | 77.78 | 78.73 |
| CDY30759 | Canola | plastid | 77.29 | 78.05 |
| VIT_04s0023g01400.t01 | Wine grape | plastid | 55.31 | 60.42 |
| KRH69944 | Soybean | cytosol, plastid | 50.72 | 57.69 |
| KRH08301 | Soybean | cytosol | 51.93 | 56.88 |
| KRH28642 | Soybean | mitochondrion | 51.21 | 50.12 |
| KRH76843 | Soybean | plastid | 50.72 | 47.62 |
| AT4G16580.1 | Thale cress | mitochondrion | 53.14 | 47.11 |
| EER90674 | Sorghum | mitochondrion, plastid | 47.58 | 42.27 |
| Zm00001d034575_P001 | Maize | plastid | 47.34 | 42.06 |
| Zm00001d013027_P002 | Maize | mitochondrion | 46.86 | 41.45 |
| Os03t0809300-01 | Rice | plastid | 46.86 | 40.5 |
| AT2G30170.1 | Thale cress | mitochondrion, plastid | 22.71 | 31.54 |
| AT4G33500.1 | Thale cress | plastid | 26.09 | 14.92 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | EntrezGene:836805 | UniProt:A0A178UQN8 |
| ProteinID:AED98255.1 | ProteinID:AED98256.1 | EMBL:AK117127 | ArrayExpress:AT5G66720 | EnsemblPlantsGene:AT5G66720 | RefSeq:AT5G66720 |
| TAIR:AT5G66720 | RefSeq:AT5G66720-TAIR-G | EnsemblPlants:AT5G66720.1 | TAIR:AT5G66720.1 | EMBL:AY136405 | Unigene:At.28853 |
| ProteinID:BAA97278.1 | EMBL:BT000228 | EMBL:BX833253 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 |
| RefSeq:NP_201473.1 | RefSeq:NP_975004.1 | ProteinID:OAO95444.1 | PFAM:PF13672 | PO:PO:0000293 | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR12320 | PANTHER:PTHR12320:SF16 | UniProt:Q9LVQ8 | SMART:SM00331 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI00000AC2D7 | SEG:seg | : | : |
Description
Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
Coordinates
chr5:-:26638790..26640912
Molecular Weight (calculated)
43875.7 Da
IEP (calculated)
7.774
GRAVY (calculated)
-0.183
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.