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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018331.1-P Field mustard plastid 87.92 86.75
CDY02041 Canola plastid 86.91 86.05
CDY10717 Canola plastid 86.91 86.05
GSMUA_AchrUn_... Banana cytosol, peroxisome, plastid 54.7 65.46
VIT_06s0004g07360.t01 Wine grape plastid 64.09 61.41
KRH30165 Soybean cytosol 44.97 60.36
Solyc06g007350.2.1 Tomato plastid 60.74 59.15
PGSC0003DMT400052991 Potato plastid 60.07 58.5
KRG98206 Soybean cytosol 61.07 56.35
Os01t0164600-01 Rice plastid 56.38 50.76
TraesCS3A01G100000.1 Wheat plastid 54.7 50.62
TraesCS3D01G100600.1 Wheat plastid 54.36 50.31
TraesCS3B01G116700.1 Wheat plastid 54.36 50.31
KXG31802 Sorghum plastid 54.03 49.69
Zm00001d039745_P001 Maize plastid 53.69 48.63
HORVU3Hr1G018110.1 Barley plastid 54.36 45.89
AT5G66720.1 Thale cress plastid 31.54 22.71
AT4G16580.1 Thale cress mitochondrion 32.21 20.56
AT4G33500.1 Thale cress plastid 27.85 11.46
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:1.1.1.4.1.4EntrezGene:817569UniProt:A0A178VWE2ProteinID:AAC16955.2
ProteinID:AEC08354.1EMBL:AF370298ProteinID:ANM61563.1ArrayExpress:AT2G30170EnsemblPlantsGene:AT2G30170RefSeq:AT2G30170
TAIR:AT2G30170RefSeq:AT2G30170-TAIR-GEnsemblPlants:AT2G30170.1TAIR:AT2G30170.1EMBL:AY063046GO:GO:0003674
GO:GO:0003824GO:GO:0004721GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009628GO:GO:0009987GO:GO:0010027GO:GO:0016043GO:GO:0016787
GO:GO:0019538GO:GO:0035970GO:GO:0046872GO:GO:0071482InterPro:IPR001932InterPro:IPR036457
RefSeq:NP_001077980.1RefSeq:NP_565696.1UniProt:O64730ProteinID:OAP10188.1PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR12320SMART:SM00331SMART:SM00332SUPFAM:SSF81606
UniParc:UPI000009E473SEG:seg::::
Description
Probable protein phosphatase 2C 26 [Source:UniProtKB/Swiss-Prot;Acc:O64730]
Coordinates
chr2:-:12879675..12881587
Molecular Weight (calculated)
32286.6 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.012
Length
298 amino acids
Sequence
(BLAST)
001: MAIPVTRMMV PHAIPSLRLS HPNPSRVDFL CRCAPSEIQP LRPELSLSVG IHAIPHPDKV EKGGEDAFFV SSYRGGVMAV ADGVSGWAEQ DVDPSLFSKE
101: LMANASRLVD DQEVRYDPGF LIDKAHTATT SRGSATIILA MLEEVGILKI GNVGDCGLKL LREGQIIFAT APQEHYFDCP YQLSSEGSAQ TYLDASFSIV
201: EVQKGDVIVM GSDGLFDNVF DHEIVSIVTK HTDVAESSRL LAEVASSHSR DTEFESPYAL EARAKGFDVP LWKKVLGKKL TGGKLDDVTV IVAKVVSS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.