CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039745_P001	Maize	plastid	91.98	90.58
TraesCS3A01G100000.1	Wheat	plastid	83.02	83.54
TraesCS3D01G100600.1	Wheat	plastid	82.41	82.92
TraesCS3B01G116700.1	Wheat	plastid	82.41	82.92
Os01t0164600-01	Rice	plastid	80.56	78.85
HORVU3Hr1G018110.1	Barley	plastid	83.02	76.2
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	53.09	69.08
Solyc06g007350.2.1	Tomato	plastid	55.25	58.5
VIT_06s0004g07360.t01	Wine grape	plastid	55.86	58.2
KRH30165	Soybean	cytosol	39.51	57.66
PGSC0003DMT400052991	Potato	plastid	53.7	56.86
KRG98206	Soybean	cytosol	54.94	55.11
AT2G30170.1	Thale cress	mitochondrion, plastid	49.69	54.03
CDY10717	Canola	plastid	49.07	52.82
Bra018331.1-P	Field mustard	plastid	48.77	52.32
CDY02041	Canola	plastid	48.46	52.16
OQU91878	Sorghum	cytosol	18.52	29.7
OQU85364	Sorghum	cytosol	28.7	27.76
EES07195	Sorghum	cytosol	21.91	21.32
EES05885	Sorghum	cytosol, mitochondrion, peroxisome, plastid	22.53	21.22
EER90674	Sorghum	mitochondrion, plastid	29.32	20.39
KXG39979	Sorghum	cytosol	29.01	15.8

Protein Annotations

EnsemblPlants:KXG31802	EnsemblPlantsGene:SORBI_3003G058700	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PFAM:PF07228	PFscan:PS51746	ProteinID:KXG31802	ProteinID:KXG31802.1	SEG:seg	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00022070E3	UniProt:A0A1B6Q1K6	MapMan:1.1.1.4.1.4	:

Description

hypothetical protein

Coordinates

chr3:+:5170636..5173275

Molecular Weight (calculated)

34710.2 Da

IEP (calculated)

4.874

GRAVY (calculated)

-0.121

Length

324 amino acids

Sequence
(BLAST)

001: MAVSTASRLS PPRFRAPPPS LHPPTRRSRF SPVRAAKLEA VLSIGTHLIP HPRKAAKGGE DAFFANCDAG GVFAIADGVS GWAEKDVNPA LFSRELMRNS
101: SNFLNDEEAS RDPQILLMKA HAATSSIGSA TVIIAMLEKT GTLKIASVGD CGLKVIRKGQ VMFSISPQEH YFDCPYQISS EAVGQTYQDA LVCSVNLMEG
201: DIIVSGSDGL FDNIFDQEIL SIISESPGVD EAAKALAELA RKHSVDVTFD SPYSMEARSR GFDVPWWKKL LGAKLIGGKM DDITVVVAQV KTVVVPEDEG
301: GDTEEQKGND QGAAAVVAFA EQND

Best Arabidopsis Sequence Match ( AT2G30170.1 )
(BLAST)

001: MAIPVTRMMV PHAIPSLRLS HPNPSRVDFL CRCAPSEIQP LRPELSLSVG IHAIPHPDKV EKGGEDAFFV SSYRGGVMAV ADGVSGWAEQ DVDPSLFSKE
101: LMANASRLVD DQEVRYDPGF LIDKAHTATT SRGSATIILA MLEEVGILKI GNVGDCGLKL LREGQIIFAT APQEHYFDCP YQLSSEGSAQ TYLDASFSIV
201: EVQKGDVIVM GSDGLFDNVF DHEIVSIVTK HTDVAESSRL LAEVASSHSR DTEFESPYAL EARAKGFDVP LWKKVLGKKL TGGKLDDVTV IVAKVVSS

Arabidopsis Description

Probable protein phosphatase 2C 26 [Source:UniProtKB/Swiss-Prot;Acc:O64730]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.