CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051200_P001	Maize	cytosol	71.94	72.59
Zm00001d051202_P001	Maize	peroxisome	70.75	71.39
Zm00001d051199_P001	Maize	cytosol	63.88	67.3
TraesCS7A01G362800.1	Wheat	plastid	51.94	54.38
TraesCS7D01G360300.1	Wheat	plastid	51.94	54.21
TraesCS7B01G266200.1	Wheat	plastid	51.34	53.58
HORVU7Hr1G087070.1	Barley	plastid	50.45	52.98
HORVU7Hr1G087090.1	Barley	plastid	50.45	52.98
HORVU7Hr1G087120.1	Barley	plastid	50.45	52.98
Os02t0633900-00	Rice	cytosol	47.76	50.79
EES05885	Sorghum	cytosol, mitochondrion, peroxisome, plastid	45.67	44.48
EES07195	Sorghum	cytosol	42.39	42.64
OQU91878	Sorghum	cytosol	17.91	29.7
KXG31802	Sorghum	plastid	27.76	28.7
EER90674	Sorghum	mitochondrion, plastid	31.64	22.75
KXG39979	Sorghum	cytosol	25.07	14.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1Z5RNQ2	GO:GO:0003674
GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:OQU85364	ProteinID:OQU85364	ProteinID:OQU85364.1
PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF10
SMART:SM00331	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G224350	SUPFAM:SSF81606	UniParc:UPI000B425F3E	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:57483837..57484844

Molecular Weight (calculated)

35788.1 Da

IEP (calculated)

4.720

GRAVY (calculated)

-0.118

Length

335 amino acids

Sequence
(BLAST)

001: MEKHMAQTLT EIDSRIPDAL RVAFGICRPR RPAILRGQQD EAANFAAVLL APRDANDDDG ASDAMDCDDD EAQQPEGDLG MVFASSYIKD HDEDAHFGHA
101: EAGVIGVADG VGGYRSNAGG GVDASAFSRA LMHNAYAEVA ATTAVHGARF CPRALLELAY QMTAAACTPA ASTAAIVSLA GRTLKWAFVG DSGFVVLRGG
201: RILRRFRPQQ HYFNCPYQLS SNQESDRLAD ADVGEVAAKE GDIVVLGTDG LFDNVFDAEI ERIVRMGTAL GFAPKNMAEV MAAFAFEAAT CRDRDTPYSS
301: ACRTQPGRKP FIGGKPDDIT VVVAYIVSCP IRSQI

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.