Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85364 | Sorghum | cytosol | 44.48 | 45.67 |
| EES07195 | Sorghum | cytosol | 41.28 | 42.64 |
| TraesCS3B01G217600.1 | Wheat | cytosol | 47.09 | 39.61 |
| OQU91878 | Sorghum | cytosol | 14.24 | 24.26 |
| KXG31802 | Sorghum | plastid | 21.22 | 22.53 |
| EER90674 | Sorghum | mitochondrion, plastid | 28.49 | 21.03 |
| KXG39979 | Sorghum | cytosol | 22.67 | 13.11 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | UniProt:C5XTL3 | EnsemblPlants:EES05885 |
| ProteinID:EES05885 | ProteinID:EES05885.2 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF07228 | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR12320 | PANTHER:PTHR12320:SF10 |
| SMART:SM00332 | EnsemblPlantsGene:SORBI_3004G318900 | SUPFAM:SSF81606 | unigene:Sbi.20964 | UniParc:UPI0007F251D8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:65414765..65416043
Molecular Weight (calculated)
36292.7 Da
IEP (calculated)
4.693
GRAVY (calculated)
-0.076
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLQQIRQT LQYIDARVPD ALRVALGLGN RVSPTPAPGE YDEVADFAAS LLQTPPPTED GDGPDADADD RGRTEPDAAA ASAPMTIDLA SCYVPLHDHD
101: AHFGSAKAGV FGVADGVGAY ADDGVDASAF ARGLMTRASA EVAGLEPGAH VSPCALLQRA YDGTAESGAT GASTAVILSL AGNALDWAYI GDSGFVVLRD
201: SKIVFLSTPQ RHLSLATRAK LLRFASTDAL RKQHLFSSRD PTFQLSAMAV NSDSVADAKS GQFAVRAGDV VVVGTDGLFD NILEEQLEVV VQMGTKLSFS
301: PKNMADIIAG VAYERSKQTR SRRLRRGKPD DITVLVAFIV QSDL
101: AHFGSAKAGV FGVADGVGAY ADDGVDASAF ARGLMTRASA EVAGLEPGAH VSPCALLQRA YDGTAESGAT GASTAVILSL AGNALDWAYI GDSGFVVLRD
201: SKIVFLSTPQ RHLSLATRAK LLRFASTDAL RKQHLFSSRD PTFQLSAMAV NSDSVADAKS GQFAVRAGDV VVVGTDGLFD NILEEQLEVV VQMGTKLSFS
301: PKNMADIIAG VAYERSKQTR SRRLRRGKPD DITVLVAFIV QSDL
001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
Arabidopsis Description
Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.