CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047249_P001	Maize	cytosol	71.77	75.63
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	70.87	62.43
TraesCS6B01G262200.1	Wheat	cytosol	48.95	52.08
TraesCS6D01G214500.1	Wheat	cytosol	48.65	51.76
HORVU6Hr1G059490.1	Barley	cytosol, nucleus, peroxisome	46.55	48.9
Os02t0633700-00	Rice	cytosol, peroxisome, plastid	44.14	46.08
OQU85364	Sorghum	cytosol	42.64	42.39
EES05885	Sorghum	cytosol, mitochondrion, peroxisome, plastid	42.64	41.28
OQU91878	Sorghum	cytosol	17.12	28.22
KXG31802	Sorghum	plastid	21.32	21.91
EER90674	Sorghum	mitochondrion, plastid	29.13	20.82
KXG39979	Sorghum	cytosol	25.83	14.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EntrezGene:8074788	UniProt:C5XY64
ncoils:Coil	EnsemblPlants:EES07195	ProteinID:EES07195	ProteinID:EES07195.1	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR12320	PANTHER:PTHR12320:SF10	SMART:SM00331	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G224300	SUPFAM:SSF81606
UniParc:UPI0001A85FBB	RefSeq:XP_002454219.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:57480959..57481960

Molecular Weight (calculated)

35332.8 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.171

Length

333 amino acids

Sequence
(BLAST)

001: MASALEKLEQ IQGTLAEIKE RTPDVSISRF VASVLDDSPG TEHAPSEWKI GDDDDAGAGH GRRRAEELRC DDARPCAPAL KMDWAACVLP LHGEDAHFGH
101: AEAGVVGVAD GVGGYRDRGV DAGAFARALM ANALATAERV ANAKAPKLLP RLCPMKVLER AYKNAATSGT PGGSTAAILS LHGAALRWAY IGDSAFAVFR
201: GGEIIHRSVQ QQRGFNEPYQ LSARGCGGSL AEAKVGGMPA AEHGDVVVMA TDGLFDNVHD WQLERAVRMG TELGFSPKNM ADIVAGLAYA ISNNSWACSP
301: FGIGYLKKYK EVWHGGKQDD ITVIVAYLVS EDS

Best Arabidopsis Sequence Match ( AT2G30170.3 )
(BLAST)

001: MAVADGVSGW AEQDVDPSLF SKELMANASR LVDDQEVRYD PGFLIDKAHT ATTSRGSATI ILAMLEEVGI LKIGNVGDCG LKLLREGQII FATAPQEHYF
101: DCPYQLSSEG SAQTYLDASF SIVEVQKGDV IVMGSDGLFD NVFDHEIVSI VTKHTDVAES SRLLAEVASS HSRDTEFESP YALEARAKGF DVPLWKKVLG
201: KKLTGGKLDD VTVIVAKVVS S

Arabidopsis Description

Probable protein phosphatase 2C 26 [Source:UniProtKB/Swiss-Prot;Acc:O64730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.