Factsheet for Zm00001d047249_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07195	Sorghum	cytosol	75.63	71.77
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	80.06	66.93
TraesCS6B01G262200.1	Wheat	cytosol	51.58	52.08
TraesCS6D01G214500.1	Wheat	cytosol	51.27	51.76
HORVU6Hr1G059490.1	Barley	cytosol, nucleus, peroxisome	48.73	48.58
Os02t0633700-00	Rice	cytosol, peroxisome, plastid	46.2	45.77
Zm00001d051202_P001	Maize	peroxisome	44.3	42.17
Zm00001d051200_P001	Maize	cytosol	43.99	41.87
Zm00001d051199_P001	Maize	cytosol	39.56	39.31
Zm00001d039745_P001	Maize	plastid	23.73	22.8
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	25.63	22.63
Zm00001d034575_P001	Maize	plastid	29.43	19.96
Zm00001d013027_P002	Maize	mitochondrion	29.11	19.66
Zm00001d014291_P001	Maize	plastid	26.27	14.69

Protein Annotations

EnsemblPlants:Zm00001d047249_P001	EnsemblPlants:Zm00001d047249_T001	EnsemblPlantsGene:Zm00001d047249	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF10	PFAM:PF07228	PFscan:PS51746	ProteinID:AQL05977.1	SEG:seg
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000843EE8D	UniProt:A0A1D6P825	MapMan:35.1	:

Description

Serine/threonine phosphatase family 2C

Coordinates

chr9:-:124022784..124023734

Molecular Weight (calculated)

33683.9 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.171

Length

316 amino acids

Sequence
(BLAST)

001: METLQQIQET LAEINERTPH VSISRFVASV LVEWLQTEYA TSERKSGDAA GHERDAEPSG ARPGAPTLQM DWAACVVPLH GEDAHFGHAE AGVVGVADGV
101: GGYRDRGVDA GAFARALMAN ALASAERVAK ASRKVRCGLC PKKELERAHK KAAADETPGA STAVILSLHG TALAWAYIGD SAFAVLRGGK IICRSEQQQR
201: RFNQPYQLSS EGSGGSLDEA KVGSMPTVMH GDVVVVATDG LFDNMHDWQL ERAVRMGTCL GFSPKNMADI VAGIAYGISK DNLARTPFGI GYLEGHGEVW
301: HGGKKDDITV IVAYIV

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.