Factsheet for Zm00001d051202_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051200_P001	Maize	cytosol	96.39	96.39
Zm00001d051199_P001	Maize	cytosol	86.14	89.94
OQU85364	Sorghum	cytosol	71.39	70.75
TraesCS7A01G362800.1	Wheat	plastid	50.9	52.81
HORVU7Hr1G087090.1	Barley	plastid	50.3	52.35
HORVU7Hr1G087120.1	Barley	plastid	50.3	52.35
HORVU7Hr1G087070.1	Barley	plastid	50.3	52.35
TraesCS7B01G266200.1	Wheat	plastid	50.0	51.71
TraesCS7D01G360300.1	Wheat	plastid	50.0	51.71
Os02t0633900-00	Rice	cytosol	45.18	47.62
Zm00001d047249_P001	Maize	cytosol	42.17	44.3
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	40.66	35.71
Zm00001d039745_P001	Maize	plastid	27.11	27.36
Zm00001d034575_P001	Maize	plastid	30.72	21.89
Zm00001d013027_P002	Maize	mitochondrion	30.72	21.79
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	23.49	21.79
Zm00001d014291_P001	Maize	plastid	24.4	14.34

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1D6Q5J6	ProteinID:AQK53804.1
GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF07228	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF10	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0008459911	EnsemblPlantsGene:Zm00001d051202	EnsemblPlants:Zm00001d051202_P001	EnsemblPlants:Zm00001d051202_T001	SEG:seg

Description

Serine/threonine phosphatase family 2C

Coordinates

chr4:-:148517956..148518954

Molecular Weight (calculated)

35315.9 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.069

Length

332 amino acids

Sequence
(BLAST)

001: MEKHMAETMI EFDRRIPDAL RAAFGIYRAS RPTTGQQDDA ANLAAVLLAP LDDDGASDPK AIDCDKNPMA MDCASDPIAM GCDLAMELGS CYIKKHDEDD
101: HFGHAEACVI GVADGVGGYR SQGVDASAFS RGLMNNAYAE VAKAPVPGTR FCPRALLERA HQMTAAAHTP GASTAAIVSL VGSTLKWALV GDSGFAVLRD
201: GRILCRSPTQ QHYFNCPYQL SSRQDRTRVS DALVGEVAAK EGDIVILATD GLFDNVFDDE IEGIVRMGTT LGFAPLNMAE VLAGFACEAA GCDYRDSPYS
301: LGRRQLGKSL LTGGKPDDIT VVVAYIVSPS KI

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.