Factsheet for Zm00001d051200_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051202_P001	Maize	peroxisome	96.39	96.39
Zm00001d051199_P001	Maize	cytosol	86.14	89.94
OQU85364	Sorghum	cytosol	72.59	71.94
TraesCS7A01G362800.1	Wheat	plastid	49.7	51.56
HORVU7Hr1G087090.1	Barley	plastid	49.4	51.41
HORVU7Hr1G087120.1	Barley	plastid	49.4	51.41
HORVU7Hr1G087070.1	Barley	plastid	49.4	51.41
TraesCS7B01G266200.1	Wheat	plastid	48.8	50.47
TraesCS7D01G360300.1	Wheat	plastid	48.8	50.47
Os02t0633900-00	Rice	cytosol	45.18	47.62
Zm00001d047249_P001	Maize	cytosol	41.87	43.99
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	40.96	35.98
Zm00001d039745_P001	Maize	plastid	27.11	27.36
Zm00001d034575_P001	Maize	plastid	30.42	21.67
Zm00001d013027_P002	Maize	mitochondrion	30.42	21.58
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	23.19	21.51
Zm00001d014291_P001	Maize	plastid	23.8	13.98

Protein Annotations

EnsemblPlants:Zm00001d051200_P001	EnsemblPlants:Zm00001d051200_T001	EnsemblPlantsGene:Zm00001d051200	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF10	PFAM:PF07228	PFscan:PS51746	ProteinID:AQK53803.1	SEG:seg
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00022199C1	UniProt:K7U6H1	MapMan:35.1	:

Description

Serine/threonine phosphatase family 2C

Coordinates

chr4:-:148477075..148478073

Molecular Weight (calculated)

35467.1 Da

IEP (calculated)

4.854

GRAVY (calculated)

-0.099

Length

332 amino acids

Sequence
(BLAST)

001: MEKHMAETMI EFDRRIPDAL RAAFGIYRAS RRTTGQQDDA ANLAAVLLAP LDDDGASDPI TSDCDKNPMA MDCASDPIAM GCDLAMELGS CYIKKHDEDD
101: HFGHAEACVI GVADGVGGYR SQGVDASAFS RGLMNNAYAE VAKAPVPGTR FCPRALLERA HQMTAAAHTP GASTAAIVSL VGSTLKWAFV GDSGFAVLRG
201: GRILRRSPTQ QHYFNCPYQL SSRQDRTRVA DALVGEVAAK EGDIVILGTD GLFDNVFDDE IEGIVRMGTT LGFAPLNMAE VLAGFACEAA GCDYRDSPYS
301: YLGRRQLGKS LMTGGKPDDI TVVVAYIVPP KI

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.