Factsheet for TraesCS7D01G360300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G266200.1	Wheat	plastid	96.26	96.26
TraesCS7A01G362800.1	Wheat	plastid	95.64	95.94
HORVU7Hr1G087070.1	Barley	plastid	89.72	90.28
HORVU7Hr1G087090.1	Barley	plastid	89.72	90.28
HORVU7Hr1G087120.1	Barley	plastid	89.72	90.28
Os02t0633900-00	Rice	cytosol	51.09	52.06
OQU85364	Sorghum	cytosol	54.21	51.94
TraesCS6D01G214500.1	Wheat	cytosol	49.22	50.48
Zm00001d051202_P001	Maize	peroxisome	51.71	50.0
Zm00001d051200_P001	Maize	cytosol	50.47	48.8
Zm00001d051199_P001	Maize	cytosol	44.86	45.28
TraesCS3D01G100600.1	Wheat	plastid	24.61	24.53
TraesCS6D01G099700.1	Wheat	mitochondrion	28.66	23.83
TraesCS5D01G472400.1	Wheat	plastid	30.84	20.58
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	25.86	16.8
TraesCS4D01G267000.1	Wheat	cytosol	26.17	15.19

Protein Annotations

EnsemblPlants:TraesCS7D01G360300.1	EnsemblPlantsGene:TraesCS7D01G360300	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF10	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:463256912..463257877

Molecular Weight (calculated)

33489.6 Da

IEP (calculated)

6.363

GRAVY (calculated)

0.003

Length

321 amino acids

Sequence
(BLAST)

001: MEAPPQIRQT LSEISSRTPA ALRIAVGIRL GSLPPSAAAG REDVARYAAS LARQLQPRAR RSSPPTGAAL RMSAASCYLP EHDEDAHFFH AVAGVIGVAD
101: GVGGCRLEGL DAAAFSRGLM ASALSEVVAS SAAAPPPPGG ICPYALLEKA YQQTAASGTP AASTAVIVSL AGRALRWAYV GDSGFAVFRD GRILHRSQPQ
201: QSYFNCPFQL SSDSEDSNKV SEAAVGEIAV EEGDVVVVAS DGLFDNVFDA MLEKIVQSGL ALSFTPKNMA DIIASQAYAA ARRTQDTPFS IAARGHGRNK
301: IGGKKDDTTV VVAFIESRDI A

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.