Factsheet for TraesCS3D01G100600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G100000.1	Wheat	plastid	99.38	99.38
TraesCS3B01G116700.1	Wheat	plastid	98.45	98.45
HORVU3Hr1G018110.1	Barley	plastid	97.83	89.24
KXG31802	Sorghum	plastid	82.92	82.41
Os01t0164600-01	Rice	plastid	84.47	82.18
Zm00001d039745_P001	Maize	plastid	81.06	79.33
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	52.48	67.87
Solyc06g007350.2.1	Tomato	plastid	57.14	60.13
VIT_06s0004g07360.t01	Wine grape	plastid	56.83	58.84
KRH30165	Soybean	cytosol	40.37	58.56
PGSC0003DMT400052991	Potato	plastid	55.59	58.5
KRG98206	Soybean	cytosol	55.9	55.73
AT2G30170.1	Thale cress	mitochondrion, plastid	50.31	54.36
CDY10717	Canola	plastid	49.69	53.16
Bra018331.1-P	Field mustard	plastid	49.38	52.65
CDY02041	Canola	plastid	49.07	52.49
TraesCS6D01G214500.1	Wheat	cytosol	25.16	25.88
TraesCS7D01G360300.1	Wheat	plastid	24.53	24.61
TraesCS6D01G099700.1	Wheat	mitochondrion	27.95	23.32
TraesCS5D01G472400.1	Wheat	plastid	28.88	19.33
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	28.26	18.42
TraesCS4D01G267000.1	Wheat	cytosol	29.5	17.18

Protein Annotations

EnsemblPlants:TraesCS3D01G100600.1	EnsemblPlantsGene:TraesCS3D01G100600	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320	PFAM:PF07228
PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	MapMan:1.1.1.4.1.4

Description

No Description!

Coordinates

chr3D:+:53381074..53383734

Molecular Weight (calculated)

34193.7 Da

IEP (calculated)

4.783

GRAVY (calculated)

-0.017

Length

322 amino acids

Sequence
(BLAST)

001: MAASTASRLS PPCLHAAPHH PLRRSRFSPL RAAKLEAVLS IGTHVIPHPR KVETGGEDAF FVGGDGGGVF AIADGVSGWA EKNVNPALFS RELMANSSTF
101: IKDEEVSQDP QILLMKAHAA TSSIGSATVI VAMLEKTGTL KIASVGDCGL KVIRKGQVMF STCPQEHYFD CPYQLSSEAI GQTSQDALVC TVNLMEGDMI
201: VSGSDGFFDN IFDQEILGVI NESLGTDEAA KALAELARKH SVDVTFDSPY SMEARSRGFD VPWWKKLLGA KLVGGKMDDI TVIVAQVKTV VIPDDEGSGV
301: ELEKVGGEQL AAAGVASTEQ NE

Best Arabidopsis Sequence Match ( AT2G30170.1 )
(BLAST)

001: MAIPVTRMMV PHAIPSLRLS HPNPSRVDFL CRCAPSEIQP LRPELSLSVG IHAIPHPDKV EKGGEDAFFV SSYRGGVMAV ADGVSGWAEQ DVDPSLFSKE
101: LMANASRLVD DQEVRYDPGF LIDKAHTATT SRGSATIILA MLEEVGILKI GNVGDCGLKL LREGQIIFAT APQEHYFDCP YQLSSEGSAQ TYLDASFSIV
201: EVQKGDVIVM GSDGLFDNVF DHEIVSIVTK HTDVAESSRL LAEVASSHSR DTEFESPYAL EARAKGFDVP LWKKVLGKKL TGGKLDDVTV IVAKVVSS

Arabidopsis Description

Probable protein phosphatase 2C 26 [Source:UniProtKB/Swiss-Prot;Acc:O64730]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.