Factsheet for Solyc06g007350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052991	Potato	plastid	93.14	93.14
VIT_06s0004g07360.t01	Wine grape	plastid	66.67	65.59
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	51.63	63.45
AT2G30170.1	Thale cress	mitochondrion, plastid	59.15	60.74
KRH30165	Soybean	cytosol	43.46	59.91
KRG98206	Soybean	cytosol	61.76	58.51
TraesCS3A01G100000.1	Wheat	plastid	60.46	57.45
TraesCS3D01G100600.1	Wheat	plastid	60.13	57.14
TraesCS3B01G116700.1	Wheat	plastid	60.13	57.14
CDY10717	Canola	plastid	55.56	56.48
Bra018331.1-P	Field mustard	plastid	55.23	55.96
CDY02041	Canola	plastid	54.9	55.81
Os01t0164600-01	Rice	plastid	60.13	55.59
KXG31802	Sorghum	plastid	58.5	55.25
Zm00001d039745_P001	Maize	plastid	58.5	54.41
HORVU3Hr1G018110.1	Barley	plastid	60.13	52.12
Solyc07g064390.1.1	Tomato	cytosol	24.51	26.79
Solyc01g081000.2.1	Tomato	cytosol	26.8	25.87
Solyc12g005190.1.1	Tomato	plastid	31.7	25.73
Solyc07g064310.1.1	Tomato	mitochondrion	30.39	24.93
Solyc10g079180.2.1	Tomato	cytoskeleton, cytosol, peroxisome	25.16	24.21
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	29.41	23.75
Solyc04g025640.1.1	Tomato	cytosol	6.21	20.88
Solyc12g026410.1.1	Tomato	cytosol	19.28	19.6
Solyc09g010590.1.1	Tomato	nucleus	11.44	19.44
Solyc12g089090.1.1	Tomato	mitochondrion	29.41	17.34
Solyc01g105020.2.1	Tomato	nucleus, plastid	27.45	7.99

Protein Annotations

EnsemblPlants:Solyc06g007350.2.1	EnsemblPlantsGene:Solyc06g007350.2	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320	PFAM:PF07228
PFscan:PS51746	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000276610F	UniProt:K4C3B8
MapMan:1.1.1.4.1.4	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:1383164..1387979

Molecular Weight (calculated)

32957.4 Da

IEP (calculated)

5.633

GRAVY (calculated)

0.093

Length

306 amino acids

Sequence
(BLAST)

001: MAISILRPSI SLPQHFLNSM NPQKFSSISV IRKKQSFLHC VASDSAPSPA RQEMSLSVGM YLIPHPNKVE KGGEDAFFVS SDNGGVIVVA DGVSGWAEKN
101: VDPALFSREL VANVSSLVGN VEVNDDPRIL IKGAHAATSS IGSATVIVSV FENGILKIAS VGDCGLRVIR KGQMIFSTFP LEHYFDCPYQ LSSEAVSQTY
201: LDAIVSTVNL QVGDTIIMGS DGLFDNIFDQ EIVSVVTTND DVSNAAKALA DLARNHSVDT KFDSPFSLEA RARGFDVPWW KKVFGMKLTG GKLDDITVIV
301: GKVKNT

Best Arabidopsis Sequence Match ( AT2G30170.1 )
(BLAST)

001: MAIPVTRMMV PHAIPSLRLS HPNPSRVDFL CRCAPSEIQP LRPELSLSVG IHAIPHPDKV EKGGEDAFFV SSYRGGVMAV ADGVSGWAEQ DVDPSLFSKE
101: LMANASRLVD DQEVRYDPGF LIDKAHTATT SRGSATIILA MLEEVGILKI GNVGDCGLKL LREGQIIFAT APQEHYFDCP YQLSSEGSAQ TYLDASFSIV
201: EVQKGDVIVM GSDGLFDNVF DHEIVSIVTK HTDVAESSRL LAEVASSHSR DTEFESPYAL EARAKGFDVP LWKKVLGKKL TGGKLDDVTV IVAKVVSS

Arabidopsis Description

Probable protein phosphatase 2C 26 [Source:UniProtKB/Swiss-Prot;Acc:O64730]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.