Factsheet for Solyc12g089090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039957	Potato	mitochondrion	97.69	97.69
GSMUA_Achr8P31180_001	Banana	cytosol	22.93	73.46
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	53.56	73.35
VIT_18s0001g12160.t01	Wine grape	extracellular	65.9	65.9
Solyc12g005190.1.1	Tomato	plastid	45.28	62.33
KRH15248	Soybean	mitochondrion	60.12	61.66
AT4G16580.1	Thale cress	mitochondrion	54.91	61.03
KRH05793	Soybean	mitochondrion	59.34	60.87
CDY60192	Canola	mitochondrion	54.72	60.81
Bra038489.1-P	Field mustard	mitochondrion	54.72	60.81
Solyc07g064310.1.1	Tomato	mitochondrion	43.35	60.32
CDY40532	Canola	mitochondrion	54.34	60.13
GSMUA_Achr6P35080_001	Banana	plastid	52.99	58.26
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	52.41	57.87
TraesCS6A01G111100.1	Wheat	mitochondrion	41.23	55.73
TraesCS6D01G099700.1	Wheat	mitochondrion	41.23	55.44
GSMUA_AchrUn_...	Banana	plastid	48.75	53.6
TraesCS6B01G139200.1	Wheat	mitochondrion	40.46	51.47
EER90674	Sorghum	mitochondrion, plastid	45.47	50.64
HORVU6Hr1G019900.1	Barley	plastid	41.62	50.23
Zm00001d013027_P002	Maize	mitochondrion	44.89	49.79
Zm00001d034575_P001	Maize	plastid	44.32	49.36
Os03t0809300-01	Rice	plastid	44.89	48.64
Solyc07g064390.1.1	Tomato	cytosol	21.77	40.36
Solyc10g079180.2.1	Tomato	cytoskeleton, cytosol, peroxisome	23.7	38.68
Solyc01g081000.2.1	Tomato	cytosol	22.74	37.22
Solyc09g010590.1.1	Tomato	nucleus	11.95	34.44
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	21.39	32.46
Solyc04g025640.1.1	Tomato	cytosol	5.2	29.67
Solyc06g007350.2.1	Tomato	plastid	17.34	29.41
Solyc12g026410.1.1	Tomato	cytosol	15.8	27.24
Solyc01g105020.2.1	Tomato	nucleus, plastid	21.58	10.66

Protein Annotations

EnsemblPlants:Solyc12g089090.1.1	EnsemblPlantsGene:Solyc12g089090.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI00027695CE	UniProt:K4DGY0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr12:-:64214968..64218876

Molecular Weight (calculated)

55415.9 Da

IEP (calculated)

7.893

GRAVY (calculated)

-0.276

Length

519 amino acids

Sequence
(BLAST)

001: MPSNYLFRLS RAARQGLQKS ISGKESGLQD SVEILVAQGR LLFGNSKCFY SVPFARATDL NVLVRPGTLA AAQANLHVAN QKKNISVVGA ISRAVSIPSV
101: SGPAFHICGY HIDRVILDPA ESLSDSDSHK APMEICGSRT CPPGCSSSKM TSRHLNGVLS VNNPITSYSN KSFDNCRKAS MSLRNKNQPN NFLLYGYFAY
201: NVAKRRGNSN LYEGFGLMGF HTSSTASSST GTAHDVSFGS STCGVQLSSS ADSSEQNIRI DRTLKLNSGS CYLPHPDKED TGGEDAHFIC SDEQAIGVAD
301: GVGGWADLGI DAGKYARELM SNSVAAIQDE PKGSVDPARV LDKAYTCTKA KGSSTACIIA LTDQGLHAIN LGDSGFIVVR DGSTVFRSPV QQHDFNFTYQ
401: LESGNAGDLP SSGEVFKIPV AQGDVIIAGT DGLFDNLYNN DINAIVVHAT RAGLGPQVTA QKIAALARQR AQDKNRQTPF SSAAQEAGFR YYGGKLDDIT
501: VVVSYISSDR NERSNSLKM

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.