Factsheet for GSMUA_Achr6P35080_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 5
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P31180_001	Banana	cytosol	27.12	79.01
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	74.58	74.89
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	48.73	60.69
PGSC0003DMT400013180	Potato	mitochondrion	49.58	59.54
GSMUA_AchrUn_...	Banana	plastid	54.24	54.24
KRH15248	Soybean	mitochondrion	57.84	53.95
VIT_18s0001g12160.t01	Wine grape	extracellular	59.32	53.95
EER90674	Sorghum	mitochondrion, plastid	53.18	53.86
Zm00001d013027_P002	Maize	mitochondrion	52.97	53.42
KRH05793	Soybean	mitochondrion	57.2	53.36
Solyc12g089090.1.1	Tomato	mitochondrion	58.26	52.99
Bra038489.1-P	Field mustard	mitochondrion	52.12	52.68
CDY60192	Canola	mitochondrion	52.12	52.68
Zm00001d034575_P001	Maize	plastid	51.91	52.58
AT4G16580.1	Thale cress	mitochondrion	51.91	52.46
PGSC0003DMT400039957	Potato	mitochondrion	57.63	52.41
CDY40532	Canola	mitochondrion	51.27	51.6
Os03t0809300-01	Rice	plastid	51.06	50.31
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	17.16	32.53
GSMUA_Achr5P10960_001	Banana	cytosol	31.57	29.1
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	20.55	28.36
GSMUA_Achr2P22130_001	Banana	plastid	24.58	15.14
GSMUA_Achr6P10470_001	Banana	nucleus	23.94	12.57

Protein Annotations

EnsemblPlants:GSMUA_Achr6P35080_001	EnsemblPlants:GSMUA_Achr6T35080_001	EnsemblPlantsGene:GSMUA_Achr6G35080_001	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000294BAA2	UniProt:M0TCV1	MapMan:35.1	:	:

Description

stage II sporulation protein E, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G35080_001]

Coordinates

chr6:-:33426073..33432150

Molecular Weight (calculated)

51021.9 Da

IEP (calculated)

7.518

GRAVY (calculated)

-0.284

Length

472 amino acids

Sequence
(BLAST)

001: MPSTYLPKHK GLQTSSELLR SRGRSFLFGN TCFVLSEPFS ALGSGFHLLS RPSSSDCDRR ATQSGIGTLL RSVNNQLSQP AQRFPFRWSI MSASSAFLRG
101: SDSFARHLAK DNARSGNGLN GVMRVDIGYS YKGLDHCRRA SGSLKNREPW GTNMIYKCFW SNAYGLNWRS KSLVDPGSQD YRTSCTAPYS AGVAPDVSFD
201: AAMHEEQLQT PDLNSEQKIL GDKFLKLLSG SCYLPHPKKE ETGGEDAHFI CVNEQVIGVA DGVGGWADLG IDAGQYAREL MSNSVNAIQE EPKGSVDPAR
301: VLDKAYSITK ARGSSTACII ALTDQGIHAI NLGDSGFIVV RDGCTIIRSP VQQHDFNFTY QLESGNGSDL PSAAQVFTFL VASGDVIIAG TDGLFDNLYN
401: NEITAVVVHA TRAGLGPQVT AQKIAALARQ RALDKNRQTP FSTAAQDAGY RYYGGKLDDI TVVVSHVTAS DA

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.