Factsheet for GSMUA_Achr5P10960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g05820.t01	Wine grape	cytosol	22.66	47.15
VIT_18s0001g01220.t01	Wine grape	cytosol, peroxisome, plastid	22.07	43.63
PGSC0003DMT400087322	Potato	cytosol	23.44	42.86
PGSC0003DMT400030602	Potato	cytosol	7.03	42.35
PGSC0003DMT400049861	Potato	cytosol, peroxisome, plastid	14.45	42.05
Solyc07g064390.1.1	Tomato	cytosol	22.85	41.79
PGSC0003DMT400021083	Potato	cytosol	25.0	40.76
PGSC0003DMT400096525	Potato	mitochondrion	14.45	40.22
GSMUA_Achr8P31180_001	Banana	cytosol	12.7	40.12
Solyc01g081000.2.1	Tomato	cytosol	23.63	38.17
PGSC0003DMT400004514	Potato	nucleus	23.83	38.12
Solyc10g079180.2.1	Tomato	cytoskeleton, cytosol, peroxisome	23.44	37.74
Solyc09g010590.1.1	Tomato	nucleus	12.5	35.56
VIT_08s0007g08670.t01	Wine grape	mitochondrion, nucleus, peroxisome	15.82	35.06
PGSC0003DMT400095232	Potato	cytosol, peroxisome, plastid	9.18	34.56
VIT_17s0000g07010.t01	Wine grape	cytosol, mitochondrion, peroxisome	15.23	34.06
PGSC0003DMT400049848	Potato	cytosol	20.51	33.65
GSMUA_Achr6P35080_001	Banana	plastid	29.1	31.57
Solyc04g025640.1.1	Tomato	cytosol	5.47	30.77
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	27.73	30.21
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	14.65	30.12
GSMUA_AchrUn_...	Banana	plastid	26.76	29.03
Solyc12g026410.1.1	Tomato	cytosol	15.43	26.25
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	14.45	21.64
GSMUA_Achr2P22130_001	Banana	plastid	19.34	12.92
GSMUA_Achr6P10470_001	Banana	nucleus	20.7	11.79

Protein Annotations

EnsemblPlants:GSMUA_Achr5P10960_001	EnsemblPlants:GSMUA_Achr5T10960_001	EnsemblPlantsGene:GSMUA_Achr5G10960_001	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000294ED5E	UniProt:M0SXH5	MapMan:35.1	:	:	:

Description

Putative Probable protein phosphatase 2C 55 [Source:GMGC_GENE;Acc:GSMUA_Achr5G10960_001]

Coordinates

chr5:-:7905772..7909367

Molecular Weight (calculated)

55554.4 Da

IEP (calculated)

6.627

GRAVY (calculated)

-0.181

Length

512 amino acids

Sequence
(BLAST)

001: MKAGSCYIPQ KTKLIGDDAH FVCEHEQVVG VADGVGGWAK LGVDAGEYAR ELMSHAEKAV RASPEGCVDP HQVLATAHAR TNALGSSTAC IVALKDQYIH
101: TVNIGDSGFL VVRNNEVFYH SPTQQLRFNR PYQLQKSGGE TLNDAEVSTI KSIGVEPGDI IVVGTDGVFD NLFDREVIRV IKPRLALSVS AERMANLIAD
201: EARRNSIRRT KETPFSIACR KAGNPRKGGK KDDITVVVMC ILEADELDKS HEAVEKRTPL KMKAGSYYIP HMRKLKGEDA HFICEHEQVV GVADGVGGWA
301: KLGIDAGEYA RELMSRAEQA VRASPEGCVD PFQVLATAHA LTNALGASTA CIMALKGQYI HTVNIGDSGF LVVRDDAVLY HSPAQQRGFN TPYQLQNSGE
401: TLNDAEVSTV ASMTFVKSMG VEPGDIIVVA TDGVFDNLFD SEVVRLIKSG LVLNLSAERI ASLIADEAQR NSLRRTKETP FSIACRKAGK RRKGGKKDDI
501: TVVVMFIIEA DD

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.