Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g08670.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 93.01 | 92.21 |
| VIT_08s0007g05820.t01 | Wine grape | cytosol | 38.43 | 35.77 |
| VIT_18s0001g01220.t01 | Wine grape | cytosol, peroxisome, plastid | 35.37 | 31.27 |
| VIT_04s0023g01400.t01 | Wine grape | plastid | 37.12 | 22.43 |
| VIT_06s0004g07360.t01 | Wine grape | plastid | 25.76 | 18.97 |
| VIT_18s0001g12160.t01 | Wine grape | extracellular | 37.55 | 16.57 |
| GSMUA_Achr5P10960_001 | Banana | cytosol | 34.06 | 15.23 |
| VIT_12s0055g01130.t01 | Wine grape | plastid | 27.95 | 8.29 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100260377 | wikigene:100260377 | Gene3D:3.60.40.10 | MapMan:35.1 |
| ProteinID:CBI15146 | ProteinID:CBI15146.3 | UniProt:D7SI36 | EMBL:FN594950 | InterPro:IPR036457 | EntrezGene:LOC100260377 |
| wikigene:LOC100260377 | InterPro:PPM-type_dom_sf | PANTHER:PTHR12320 | PANTHER:PTHR12320:SF14 | SUPFAM:SSF81606 | TIGR:TC52637 |
| UniParc:UPI0001BE0B08 | ArrayExpress:VIT_17s0000g07010 | EnsemblPlantsGene:VIT_17s0000g07010 | EnsemblPlants:VIT_17s0000g07010.t01 | unigene:Vvi.14787 | RefSeq:XP_002284372 |
| RefSeq:XP_002284372.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr17:-:7713410..7715383
Molecular Weight (calculated)
25293.5 Da
IEP (calculated)
7.928
GRAVY (calculated)
-0.180
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MISGSKFISS KDGKNPKTKR DVHVKVGQTF VIAHGSCQFV TDLVNNCFHI ANKIKGFINP IDLLNHAYLE TKVPGSSTAC IITLNEWCLH AVNMGDNGFI
101: LLRNEEILYE SPVQQHTYKT PYQLGKANDS PEEIKLTELE PGDIIIAGSA GLFNNLFTHE IKDLVINEIR KDPAPSPDMI AAEIAKNATE RSIDKCRFTP
201: YSKAAWLAGK RHKGGKIGEV TAIFAFILP
101: LLRNEEILYE SPVQQHTYKT PYQLGKANDS PEEIKLTELE PGDIIIAGSA GLFNNLFTHE IKDLVINEIR KDPAPSPDMI AAEIAKNATE RSIDKCRFTP
201: YSKAAWLAGK RHKGGKIGEV TAIFAFILP
001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
Arabidopsis Description
Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.