Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- plastid 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g07010.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 92.21 | 93.01 |
| VIT_08s0007g05820.t01 | Wine grape | cytosol | 38.1 | 35.77 |
| VIT_18s0001g01220.t01 | Wine grape | cytosol, peroxisome, plastid | 35.93 | 32.05 |
| VIT_04s0023g01400.t01 | Wine grape | plastid | 37.23 | 22.69 |
| VIT_06s0004g07360.t01 | Wine grape | plastid | 26.41 | 19.61 |
| VIT_18s0001g12160.t01 | Wine grape | extracellular | 38.1 | 16.96 |
| GSMUA_Achr5P10960_001 | Banana | cytosol | 35.06 | 15.82 |
| VIT_12s0055g01130.t01 | Wine grape | plastid | 29.87 | 8.94 |
Protein Annotations
| ArrayExpress:VIT_08s0007g08670 | EMBL:FN595991 | EnsemblPlants:VIT_08s0007g08670.t01 | EnsemblPlantsGene:VIT_08s0007g08670 | EntrezGene:104880100 | Gene3D:3.60.40.10 |
| InterPro:IPR036457 | InterPro:PPM-type_dom_sf | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | PANTHER:PTHR12320 | PANTHER:PTHR12320:SF14 |
| ProteinID:CCB55120 | ProteinID:CCB55120.1 | RefSeq:XP_019077107.1 | SUPFAM:SSF81606 | UniParc:UPI0001983E1E | UniProt:F6HKW3 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:22044485..22046307
Molecular Weight (calculated)
25589.9 Da
IEP (calculated)
8.325
GRAVY (calculated)
-0.226
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMISGSKFI SSKDGKNPKT KKDVHVKIGQ TFVIAHGSCQ FVRDLADNCS HIANKIKGLI NPIDLLNHAY LETKVPGSST ACIITLNEWC LHAVNIGDNG
101: FILLRNEEIL YESPVQQHTY KTPYQLGNAN DSLEEIKLTE LEPGDIIIAG SAGLFNNLFT HEIKDLVIKE IRKDPAPSPD MIAAEIAKNA IERSIDKYRF
201: TPYSKAAWQA GKRHKGGKMG DVTAIFAFIL P
101: FILLRNEEIL YESPVQQHTY KTPYQLGNAN DSLEEIKLTE LEPGDIIIAG SAGLFNNLFT HEIKDLVIKE IRKDPAPSPD MIAAEIAKNA IERSIDKYRF
201: TPYSKAAWQA GKRHKGGKMG DVTAIFAFIL P
001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
Arabidopsis Description
Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.