Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400095232 | Potato | cytosol, peroxisome, plastid | 74.73 | 50.0 |
| PGSC0003DMT400096525 | Potato | mitochondrion | 75.82 | 37.5 |
| Solyc07g064390.1.1 | Tomato | cytosol | 63.74 | 20.71 |
| VIT_08s0007g05820.t01 | Wine grape | cytosol | 37.36 | 13.82 |
| Solyc01g081000.2.1 | Tomato | cytosol | 47.25 | 13.56 |
| VIT_18s0001g01220.t01 | Wine grape | cytosol, peroxisome, plastid | 38.46 | 13.51 |
| Solyc10g079180.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 32.97 | 9.43 |
| Solyc12g026410.1.1 | Tomato | cytosol | 30.77 | 9.3 |
| Solyc12g005190.1.1 | Tomato | plastid | 31.87 | 7.69 |
| Solyc04g080090.2.1 | Tomato | mitochondrion, plastid | 30.77 | 7.39 |
| Solyc07g064310.1.1 | Tomato | mitochondrion | 27.47 | 6.7 |
| Solyc06g007350.2.1 | Tomato | plastid | 20.88 | 6.21 |
| GSMUA_Achr5P10960_001 | Banana | cytosol | 30.77 | 5.47 |
| Solyc12g089090.1.1 | Tomato | mitochondrion | 29.67 | 5.2 |
| Solyc01g105020.2.1 | Tomato | nucleus, plastid | 26.37 | 2.28 |
| Solyc09g010590.1.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc04g025640.1.1 | EnsemblPlantsGene:Solyc04g025640.1 | InterPro:IPR036457 | InterPro:PPM-type_dom_sf | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR12320 | PANTHER:PTHR12320:SF14 | SUPFAM:SSF81606 | UniParc:UPI0002765C28 | UniProt:K4BR08 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4:-:21550198..21550473
Molecular Weight (calculated)
10288.4 Da
IEP (calculated)
4.429
GRAVY (calculated)
-0.059
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MRDVVQKVNL GDIGFVSIRD GVIVYKLEIQ QKGLDYPFQI GNGVKFEDSI VSQEINVTVR TWDVIVIPTD GLFDNVHNKE LEKLIRDGLA D
001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKLVSG SCYLPHPEKE ATGGEDAHFI CDEEQAIGVA
201: DGVGGWAEVG VNAGLFSREL MSYSVSAIQE QHKGSSIDPL VVLEKAHSQT KAKGSSTACI IVLKDKGLHA INLGDSGFTV VREGTTVFQS PVQQHGFNFT
301: YQLESGNSAD VPSSGQVFTI DVQSGDVIVA GTDGVYDNLY NEEITGVVVS SVRAGLDPKG TAQKIAELAR QRAVDKKRQS PFATAAQEAG YRYYGGKLDD
401: ITAVVSYVTS S
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKLVSG SCYLPHPEKE ATGGEDAHFI CDEEQAIGVA
201: DGVGGWAEVG VNAGLFSREL MSYSVSAIQE QHKGSSIDPL VVLEKAHSQT KAKGSSTACI IVLKDKGLHA INLGDSGFTV VREGTTVFQS PVQQHGFNFT
301: YQLESGNSAD VPSSGQVFTI DVQSGDVIVA GTDGVYDNLY NEEITGVVVS SVRAGLDPKG TAQKIAELAR QRAVDKKRQS PFATAAQEAG YRYYGGKLDD
401: ITAVVSYVTS S
Arabidopsis Description
Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.