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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 7
  • extracellular 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400036153 Potato mitochondrion, plastid 94.91 94.91
Solyc12g005190.1.1 Tomato plastid 71.58 70.82
Solyc04g080090.2.1 Tomato mitochondrion, plastid 45.84 45.12
Solyc12g089090.1.1 Tomato mitochondrion 60.32 43.35
Solyc07g064390.1.1 Tomato cytosol 27.61 36.79
Solyc10g079180.2.1 Tomato cytoskeleton, cytosol, peroxisome 31.1 36.48
Solyc01g081000.2.1 Tomato cytosol 30.83 36.28
Solyc09g010590.1.1 Tomato nucleus 15.82 32.78
Solyc06g007350.2.1 Tomato plastid 24.93 30.39
Solyc04g025640.1.1 Tomato cytosol 6.7 27.47
Solyc12g026410.1.1 Tomato cytosol 21.72 26.91
Solyc01g105020.2.1 Tomato nucleus, plastid 26.27 9.32
Protein Annotations
EnsemblPlants:Solyc07g064310.1.1EnsemblPlantsGene:Solyc07g064310.1Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824InterPro:IPR001932
InterPro:IPR036457InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domKEGG:04658+3.1.3.16KEGG:04660+3.1.3.16PANTHER:PTHR12320
PANTHER:PTHR12320:SF16PFAM:PF07228PFscan:PS51746SMART:SM00331SMART:SM00332SUPFAM:SSF81606
UniParc:UPI000276C428UniProt:K4CHB2MapMan:35.1:::
Description
No Description!
Coordinates
chr7:-:66515096..66516217
Molecular Weight (calculated)
39885.2 Da
IEP (calculated)
6.664
GRAVY (calculated)
-0.153
Length
373 amino acids
Sequence
(BLAST)
001: MAVCGSRTHI GHFVGNMTAR RLQCSLSVKG CTVSYNKRGL QNVSKANINL GNKGRPNNFM LYQYLTTNVA KRRTNLNPHK GFGLEGFRNL SHECFYSGTA
101: SASNVSSDNS KGTEQVVDVV NSSEAQIPLQ LNSGSFYLPH PAKAKTGGED AHFICTLTPA IGVADGVGGW ADLGIDAGLY ARELMSHSLS AIQDEPKGSV
201: DLIRVLEKAY VRTKAKGSCT ACIVALTEGG LYAVNLGDSG FMLVRNGCAA FKSPSQQHGF NFPYQLDCNN AGDSPSSAMV FKITALPGDV LIVGTDGLFD
301: NLYDEDISGV VFQAMEDGLA PQMTAQRIAE LAQLRAMDHI KSSPFSDGAR EAGFDYHGGK LDDITVVVSY ITE
Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)
001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
Arabidopsis Description
Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.