Factsheet for GSMUA_Achr8P31180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	extracellular, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G111100.1	Wheat	mitochondrion	76.54	32.29
TraesCS6D01G099700.1	Wheat	mitochondrion	76.54	32.12
GSMUA_AchrUn_...	Banana	plastid	88.89	30.51
TraesCS6B01G139200.1	Wheat	mitochondrion	74.07	29.41
HORVU6Hr1G019900.1	Barley	plastid	75.31	28.37
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	66.05	28.23
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	81.48	28.09
GSMUA_Achr6P35080_001	Banana	plastid	79.01	27.12
PGSC0003DMT400013180	Potato	mitochondrion	65.43	26.97
EER90674	Sorghum	mitochondrion, plastid	70.37	24.46
Zm00001d013027_P002	Maize	mitochondrion	70.37	24.36
Zm00001d034575_P001	Maize	plastid	69.75	24.25
CDY60192	Canola	mitochondrion	69.14	23.98
Bra038489.1-P	Field mustard	mitochondrion	69.14	23.98
AT4G16580.1	Thale cress	mitochondrion	69.14	23.98
CDY40532	Canola	mitochondrion	68.52	23.67
KRH15248	Soybean	mitochondrion	72.22	23.12
PGSC0003DMT400039957	Potato	mitochondrion	73.46	22.93
Solyc12g089090.1.1	Tomato	mitochondrion	73.46	22.93
VIT_18s0001g12160.t01	Wine grape	extracellular	73.46	22.93
KRH05793	Soybean	mitochondrion	70.99	22.73
Os03t0809300-01	Rice	plastid	66.05	22.34
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	24.07	15.66
GSMUA_Achr5P10960_001	Banana	cytosol	40.12	12.7
GSMUA_Achr2P22130_001	Banana	plastid	35.19	7.44
GSMUA_Achr6P10470_001	Banana	nucleus	32.1	5.78
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	4.32	2.05

Protein Annotations

EnsemblPlants:GSMUA_Achr8P31180_001	EnsemblPlants:GSMUA_Achr8T31180_001	EnsemblPlantsGene:GSMUA_Achr8G31180_001	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	PFAM:PF13672	PFscan:PS51746	SUPFAM:SSF81606	UniParc:UPI000295CE05
UniProt:M0TV70	MapMan:35.1	:	:	:	:

Description

Probable protein phosphatase 2C 55 [Source:GMGC_GENE;Acc:GSMUA_Achr8G31180_001]

Coordinates

chr8:-:32949740..32952853

Molecular Weight (calculated)

17473.6 Da

IEP (calculated)

4.779

GRAVY (calculated)

0.046

Length

162 amino acids

Sequence
(BLAST)

001: MLQLDIFGIR AVNLGDSGFI VVRDGCTIFR SPVQQHDFNF TYQLESNNAS DLPSAAQVFS FPVESGDVIV AGTDGLFDNL YNSEITAVVV HGIRAGLGPQ
101: VMAQKIAALA RQRAQDKNRQ TPFSAAAQEA GYRYYGGKLD DITVVVSYIT AFGNQAPSCL CT

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.