Factsheet for TraesCS6D01G099700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G111100.1	Wheat	mitochondrion	97.41	97.92
TraesCS6B01G139200.1	Wheat	mitochondrion	96.63	91.42
HORVU6Hr1G019900.1	Barley	plastid	95.08	85.35
GSMUA_Achr8P31180_001	Banana	cytosol	32.12	76.54
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	50.78	51.72
PGSC0003DMT400013180	Potato	mitochondrion	52.07	51.15
GSMUA_AchrUn_...	Banana	plastid	60.36	49.36
Bra038489.1-P	Field mustard	mitochondrion	55.7	46.04
CDY60192	Canola	mitochondrion	55.44	45.82
CDY40532	Canola	mitochondrion	54.92	45.2
AT4G16580.1	Thale cress	mitochondrion	53.89	44.54
VIT_18s0001g12160.t01	Wine grape	extracellular	56.48	42.0
KRH15248	Soybean	mitochondrion	54.66	41.7
KRH05793	Soybean	mitochondrion	54.66	41.7
Solyc12g089090.1.1	Tomato	mitochondrion	55.44	41.23
PGSC0003DMT400039957	Potato	mitochondrion	54.92	40.85
TraesCS5D01G472400.1	Wheat	plastid	48.7	39.09
TraesCS6D01G214500.1	Wheat	cytosol	23.58	29.07
TraesCS7D01G360300.1	Wheat	plastid	23.83	28.66
TraesCS3D01G100600.1	Wheat	plastid	23.32	27.95
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	28.5	22.27
TraesCS4D01G267000.1	Wheat	cytosol	26.68	18.63

Protein Annotations

EnsemblPlants:TraesCS6D01G099700.1	EnsemblPlantsGene:TraesCS6D01G099700	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SignalP:SignalP-noTM	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6D:-:62877532..62880488

Molecular Weight (calculated)

39827.6 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.045

Length

386 amino acids

Sequence
(BLAST)

001: MSPAIALRRA AAWLLRGAAG AGAGAPRAAS SAALPGLGGA LLSPARGLQG SEAAGFLGIW GGPAAGGSGG SWWFRCAASS VPRPGLLVEQ LLVGGGRSFA
101: TGAAPEEVSF SPAAREADVS QPEKSVGTSD KTMLGDRSLK LVSGVCYLPH PDKEETGGED AHFIWDEQAI GIADGVGGWA SYGIDAGQYA RDIMSNAVTA
201: IEEEPKDSID LTRVLEKAHS STTVPGSSTA CIIAITNQGI QAINLGDSGF IVIRDGCTLC RSPVQQHDFN FSYQLQSGNS SDLPNAAQVF KVPVASGDVI
301: VAGTDGLFDN LYNNDITAVV VHATRAGLEP QVTAQKIAAL ARQRAQDKNR PTPFSTAAQD AGYRYYGGKL DDITVVVSYV TAFGNS

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.