Factsheet for TraesCS6B01G139200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G099700.1	Wheat	mitochondrion	91.42	96.63
TraesCS6A01G111100.1	Wheat	mitochondrion	90.69	96.35
HORVU6Hr1G019900.1	Barley	plastid	87.99	83.49
GSMUA_Achr8P31180_001	Banana	cytosol	29.41	74.07
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	47.55	51.19
PGSC0003DMT400013180	Potato	mitochondrion	48.53	50.38
GSMUA_AchrUn_...	Banana	plastid	55.64	48.09
Bra038489.1-P	Field mustard	mitochondrion	52.45	45.82
CDY60192	Canola	mitochondrion	52.21	45.61
CDY40532	Canola	mitochondrion	51.72	44.99
AT4G16580.1	Thale cress	mitochondrion	50.49	44.11
KRH05793	Soybean	mitochondrion	51.72	41.7
KRH15248	Soybean	mitochondrion	50.98	41.11
VIT_18s0001g12160.t01	Wine grape	extracellular	52.21	41.04
Solyc12g089090.1.1	Tomato	mitochondrion	51.47	40.46
PGSC0003DMT400039957	Potato	mitochondrion	50.98	40.08
TraesCS5B01G470500.1	Wheat	plastid	45.59	38.83
TraesCS6B01G262200.1	Wheat	cytosol	22.06	28.75
TraesCS3B01G116700.1	Wheat	plastid	22.55	28.57
TraesCS7B01G266200.1	Wheat	plastid	22.3	28.35
TraesCS3B01G217600.1	Wheat	cytosol	23.04	22.98
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	26.72	21.67
TraesCS4B01G267400.1	Wheat	cytosol	25.25	18.53

Protein Annotations

EnsemblPlants:TraesCS6B01G139200.1	EnsemblPlantsGene:TraesCS6B01G139200	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:136457372..136460404

Molecular Weight (calculated)

42256.8 Da

IEP (calculated)

5.680

GRAVY (calculated)

-0.075

Length

408 amino acids

Sequence
(BLAST)

001: MSPAIALQRA AAWLLRGAAG AGAPRAASSA ALPGMGGALL SPARGLQGRE AAGFLGIWGG PAAGGGGSWW FRCAASSVPR PGLLMEQLLV GGGRSFATGA
101: APEEVSFSPA AREADVSQPE KSVGTADKTM LGDRSLKLVS GVCYLPHPDK EETGGEDAHF IWDEQAIGIA DGVGGWASYG IDAGQYARDI MSNAVTAIEE
201: EPKDSIDLTR VLEKAHSSTT VPGSSTACII AITNQGIQAI NLGDSGFIVI RDGCTLCRSP VQQHDFNFSY QLQSGNSSDL PNAAQVFKVP VASGDVIVAG
301: TDGLFDNLYN NDITAVVVHA TRAGLEPQVT AQKIAALARQ RAQDKNRPTP FSTAAQDAGY RYYGGKLDDI TVVVSHVKKL DDLIFAGIPA AVKGRSQNSG
401: ASSSCLQK

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.