Factsheet for TraesCS5B01G470500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G472400.1	Wheat	plastid	97.7	97.3
TraesCS5A01G460700.1	Wheat	plastid	93.53	97.18
Os03t0809300-01	Rice	plastid	77.87	77.87
EER90674	Sorghum	mitochondrion, plastid	75.37	77.47
Zm00001d034575_P001	Maize	plastid	74.53	76.61
Zm00001d013027_P002	Maize	mitochondrion	73.49	75.21
TraesCS6B01G139200.1	Wheat	mitochondrion	38.83	45.59
TraesCS6B01G262200.1	Wheat	cytosol	21.29	32.59
TraesCS7B01G266200.1	Wheat	plastid	20.67	30.84
TraesCS3B01G116700.1	Wheat	plastid	19.62	29.19
TraesCS3B01G217600.1	Wheat	cytosol	21.5	25.18
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	23.8	22.66
TraesCS4B01G267400.1	Wheat	cytosol	23.17	19.96

Protein Annotations

EnsemblPlants:TraesCS5B01G470500.1	EnsemblPlantsGene:TraesCS5B01G470500	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:643670665..643674359

Molecular Weight (calculated)

50135.8 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.182

Length

479 amino acids

Sequence
(BLAST)

001: MLAGGVGSNR GGSSHLSSSG ADLRGGRSFL FGNTWFMLSA YPARLLHTAD RRAPAAAFVA AAIHRTPRVV RAHGGTGQGL LQRGIVMAAC GYAFGRADLG
101: AAAKRQLEKD SSSVAAHASR VVAMGSPGTA ARPDVSFKYR GLEYCKKVGV SLRCREQWGA ARTFWTSAVG PGRQLGFSVD PWARDFSTSC AAPYSAGATE
201: SQLTLDEALQ EKQTDNSTVA SDGKSPAPEK LKLVSGSCYL PHPAKEATGG EDGHFICIDE QAIGVADGVG GWADHGVDAG LYAKELMSKS MSAIKDEPEG
301: AIDPSRVLEK AFTGTKARGS STACIITLKE QGLHAVNLGD SGFIVVRDGR TVLKSPSQQH DFNFTYQLES GGGSDLPSSA DVFHYSVASG DVIIAGTDGL
401: FDNLYDNEIT AVVVEALRSG LGAQGTAQKI AALARERAED KHRQSPFAAA AQEAGYRYYG GKLDDITVVV SYVTSAAAV

Best Arabidopsis Sequence Match ( AT5G66720.2 )
(BLAST)

001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKLVSG SCYLPHPEKE ATGGEDAHFI CDEEQAIGVA
201: DGVGGWAEVG VNAGLFSREL MSYSVSAIQE QHKGSSIDPL VVLEKAHSQT KAKGSSTACI IVLKDKGLHA INLGDSGFTV VREGTTVFQS PVQQHGFNFT
301: YQLESGNSAD VPSSGQVFTI DVQSGDVIVA GTDGVYDNLY NEEITGVVVS SVRAGLDPKG TAQKIAELAR QRAVDKKRQS PFATAAQEAG YRYYGGKLDD
401: ITAVVSYVTS S

Arabidopsis Description

Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.