Factsheet for TraesCS6D01G214500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G262200.1	Wheat	cytosol	97.44	97.44
HORVU6Hr1G059490.1	Barley	cytosol, nucleus, peroxisome	83.71	82.65
Os02t0633700-00	Rice	cytosol, peroxisome, plastid	58.47	57.37
Zm00001d047249_P001	Maize	cytosol	51.76	51.27
TraesCS7D01G360300.1	Wheat	plastid	50.48	49.22
EES07195	Sorghum	cytosol	51.76	48.65
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	48.24	39.95
TraesCS3D01G100600.1	Wheat	plastid	25.88	25.16
TraesCS6D01G099700.1	Wheat	mitochondrion	29.07	23.58
TraesCS5D01G472400.1	Wheat	plastid	32.91	21.41
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	25.24	15.99
TraesCS4D01G267000.1	Wheat	cytosol	25.56	14.47

Protein Annotations

EnsemblPlants:TraesCS6D01G214500.1	EnsemblPlantsGene:TraesCS6D01G214500	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF10	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:304994445..304995386

Molecular Weight (calculated)

34130.4 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.275

Length

313 amino acids

Sequence
(BLAST)

001: METLEPIQKT LGEIDKRIPD ALRAAFGLEK RASRSSEDAI ASFFALYLEP PHHRERRELD GEEPRALRMN WASCYAPRHN EDAHFGHDEA GVVGVADGVG
101: GYRKKGVDAG AFSRGLMTSA FLQVLATEPG TPVCPYTLLE RAYEETVASA ADGGSTAVIL SLAGTALKWA FIGDSAFAVF RDGRLVHRSQ RQQRRFNCPF
201: QLNATGKGER VNKADVGQMA VRHGDVVVLG TDGLFDNMFD AELEVVVRMG MALGFSPKNM ADVVAGIAYE MSTSKTRDSP YSADSRRLQG DHRRGGKPDD
301: ITVVVAFIVS LYS

Best Arabidopsis Sequence Match ( AT5G66720.1 )
(BLAST)

001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS

Arabidopsis Description

Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.