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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • peroxisome 1
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G214500.1 Wheat cytosol 57.37 58.47
TraesCS6B01G262200.1 Wheat cytosol 56.43 57.51
HORVU6Hr1G059490.1 Barley cytosol, nucleus, peroxisome 54.23 54.57
Os02t0633900-00 Rice cytosol 46.71 47.3
Zm00001d047249_P001 Maize cytosol 45.77 46.2
EES07195 Sorghum cytosol 46.08 44.14
Zm00001d017325_P001 Maize cytoskeleton, cytosol, peroxisome 42.63 35.98
Os01t0164600-01 Rice plastid 22.57 21.75
Os03t0809300-01 Rice plastid 28.53 19.0
Os10t0370000-02 Rice peroxisome 22.26 15.27
Os03t0192500-01 Rice cytosol 22.88 12.83
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16EntrezGene:107275989Gene3D:3.60.40.10MapMan:35.1ProteinID:BAD25305.1
ProteinID:BAS79925.1GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0005488GO:GO:0006464
GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538
GO:GO:0046872InterPro:IPR001932InterPro:IPR036457EnsemblPlantsGene:Os02g0633700EnsemblPlants:Os02t0633700-00PFAM:PF07228
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR12320PANTHER:PTHR12320:SF10UniProt:Q6H7J4
SMART:SM00332SUPFAM:SSF81606UniParc:UPI00003B440ARefSeq:XP_015624508.1SEG:seg:
Description
protein phosphatase 2C23, protein phosphatase 2C 23, protein phosphatase 34Similar to T-cell activation protein phosphatase 2C-like protein. (Os02t0633700-00)
Coordinates
chr2:-:25411509..25412468
Molecular Weight (calculated)
34730.0 Da
IEP (calculated)
4.764
GRAVY (calculated)
-0.226
Length
319 amino acids
Sequence
(BLAST)
001: MEKRMETLEQ IKETLRETSK LVPDIVRAAV GLEHHYQTVE LPHDDGCVKS FAAAFLRPQA QEQAHGDGEV QQAVRMESAS CYVPDHDEDA HFVHDAAGVV
101: GGYRRRVGVD AGAFSRGLMT SAFAQLVTAE PGTPVCPYTL LERAYEETLE SGAQGGSTAV ILSLADGNVL RWAYIGDSAF AVLRDGRVVV RSVQQQRYFN
201: APYYLGGRRG DEGMTVGMVG EMKVRRGDVV VAGTDGLFDN MSDAELEKVV QIGTALGFSP KNMADIIGGT AYEMSRCLLK DSPFAVEWRK QHENEEGHFY
301: GGKVDDITVV VACIVSSDS
Best Arabidopsis Sequence Match ( AT5G66720.1 )
(BLAST)
001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS
Arabidopsis Description
Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.