Factsheet for Zm00001d017325_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047249_P001	Maize	cytosol	66.93	80.06
EES07195	Sorghum	cytosol	62.43	70.87
TraesCS6B01G262200.1	Wheat	cytosol	40.48	48.88
TraesCS6D01G214500.1	Wheat	cytosol	39.95	48.24
HORVU6Hr1G059490.1	Barley	cytosol, nucleus, peroxisome	38.1	45.43
Os02t0633700-00	Rice	cytosol, peroxisome, plastid	35.98	42.63
Zm00001d051200_P001	Maize	cytosol	35.98	40.96
Zm00001d051202_P001	Maize	peroxisome	35.71	40.66
Zm00001d051199_P001	Maize	cytosol	34.13	40.57
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	20.63	21.79
Zm00001d039745_P001	Maize	plastid	18.52	21.28
Zm00001d034575_P001	Maize	plastid	23.55	19.1
Zm00001d013027_P002	Maize	mitochondrion	23.55	19.02
Zm00001d014291_P001	Maize	plastid	20.63	13.81

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1D6HE41	ProteinID:AQK72918.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF13672
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF10	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000843B85F	EnsemblPlantsGene:Zm00001d017325	EnsemblPlants:Zm00001d017325_P001	EnsemblPlants:Zm00001d017325_T001	SEG:seg

Description

T-cell activation protein phosphatase 2C-like protein

Coordinates

chr5:-:192848229..192850437

Molecular Weight (calculated)

40719.5 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.139

Length

378 amino acids

Sequence
(BLAST)

001: MTIALETLQL QQIQQTLAEI KERTPDVNIS RFVASVLGDW METEYATSER KRGDAGHGRG AGPSDARPCA PTLEMDWAAC VLPLHGEDAH FGHAEAGVVG
101: VADGVGGYRD NGVDAGAFAR ALMANALASA ERVAKASRRL RRLCPEKVLE RAHKKAAADE TPGASTAVIL ALHGTALTWA YIGDSAFAVL RGGKIICRSV
201: QQQRRFNYPY QLSSEGGGLD DAKVGSMPAA RDGDVVVVGT DGLFDNVHDW QLERAVRMGT NLGFSPKNMA DIIAGIAYGI SKDKWACTPF GMGYMKITAP
301: SVPSYVELFG SAPALPKAMP SSSLNNIFDS FKQPASTLSL PRSKHSSMPV FDNPVYDDNI FIEVSRELDL STFIRIWI

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.