Factsheet for Zm00001d014291_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91878	Sorghum	cytosol	25.66	71.78
Os10t0370000-02	Rice	peroxisome	54.69	66.45
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	41.95	66.2
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	50.97	58.3
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	51.68	58.05
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	51.33	58.0
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	50.8	57.06
CDY72337	Canola	cytosol, peroxisome	23.54	37.68
GSMUA_Achr2P22130_001	Banana	plastid	42.65	31.46
Zm00001d039745_P001	Maize	plastid	17.35	29.79
VIT_12s0055g01130.t01	Wine grape	plastid	39.29	28.76
Zm00001d047249_P001	Maize	cytosol	14.69	26.27
KRH10513	Soybean	mitochondrion, plastid	34.34	24.94
Zm00001d034575_P001	Maize	plastid	20.18	24.46
Zm00001d051202_P001	Maize	peroxisome	14.34	24.4
Zm00001d013027_P002	Maize	mitochondrion	20.0	24.15
GSMUA_Achr6P10470_001	Banana	nucleus	38.05	23.92
Zm00001d051200_P001	Maize	cytosol	13.98	23.8
CDX68984	Canola	plastid	29.2	23.61
AT4G33500.1	Thale cress	plastid	29.03	22.65
Zm00001d051199_P001	Maize	cytosol	12.21	21.7
Bra011448.1-P	Field mustard	plastid	29.73	21.16
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	13.81	20.63
PGSC0003DMT400032725	Potato	nucleus	33.1	19.56
Solyc01g105020.2.1	Tomato	nucleus, plastid	32.74	17.6
CDX75361	Canola	plastid	26.19	17.56

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100285253	Gene3D:3.60.40.10	MapMan:35.1	ProteinID:AQK65772.1
UniProt:B6U2F2	EMBL:BT067381	EMBL:EU971417	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	EMBL:KJ855135	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR12320	PANTHER:PTHR12320:SF36	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000182EDA1
EnsemblPlantsGene:Zm00001d014291	EnsemblPlants:Zm00001d014291_P001	EnsemblPlants:Zm00001d014291_T001	SEG:seg	:	:

Description

Probable protein phosphatase 2C 71

Coordinates

chr5:+:39715418..39722456

Molecular Weight (calculated)

58878.9 Da

IEP (calculated)

4.195

GRAVY (calculated)

-0.344

Length

565 amino acids

Sequence
(BLAST)

001: MAELPLAAGL MDLRNCKLSP KPAPPLPLPA LRRMHTSATA TTAPSPRHAV PELHSTTELA DGSIVFRFGH PKSKALEPEP ASVKTSPYSR VAPASGAVPG
101: SQMEPEIDSE HGLDGVRIGT TAGVEKPSPN AAAEAWPTPP PPDAGAVTGA TSAALEEAPE QEAGSNAAVE EVDTRPSSAE SLVPSRSEDG PKGDGVAVEA
201: GMPTSGAAMD TIETALEGRG ASEDDSAVDV SGGLDEAATS GLEDSEAASE GSTAQDFYTD VETESSGSSS DEQRAEFGFS LPPPEQVSNK ADWKNDTSEV
301: KSSDRMIPIA QRTRVLSSGA AILPHPSKVA TGGEDAYFIA ANGWFGVADG VGQWSFEGIN AGLYARELMD GCKKFVTENQ GDPDLRPEQI LSKAVDEACS
401: PGSCTVLVAH FDGQALQASN IGDSGFIVIR NGEVFKKSKP TLYGFNFPLQ IQKGDDPSKF VQNYAIDLED GDAIVTATDG LFDNVYEHEI AGIVSKSLQA
501: DLEPAEIAEH LAVKAQEVGR SGAGRSPFSD AALSAGYLGY SGGKLDDIAV VVSIVRTEIQ EDRLR

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.