Factsheet for Bra011448.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72337	Canola	cytosol, peroxisome	43.58	98.02
AT4G33500.1	Thale cress	plastid	60.58	66.44
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	10.45	44.15
OQU91878	Sorghum	cytosol	10.96	43.07
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	17.63	39.11
HORVU5Hr1G117220.2	Barley	mitochondrion	10.45	37.9
HORVU2Hr1G018620.1	Barley	cytosol	6.8	36.24
Os10t0370000-02	Rice	peroxisome	21.03	35.91
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	20.91	33.0
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	20.78	32.8
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	20.28	32.59
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	20.4	32.4
Os03t0192500-01	Rice	cytosol	22.17	30.93
TraesCS4D01G267000.1	Wheat	cytosol	20.91	30.02
Zm00001d014291_P001	Maize	plastid	21.16	29.73
TraesCS4A01G038300.1	Wheat	cytosol	20.65	29.66
TraesCS4B01G267400.1	Wheat	cytosol	20.28	28.96
KXG39979	Sorghum	cytosol	21.28	28.4
Bra018331.1-P	Field mustard	plastid	10.45	27.48
KRH10513	Soybean	mitochondrion, plastid	25.06	25.58
Bra038489.1-P	Field mustard	mitochondrion	14.86	25.27
VIT_12s0055g01130.t01	Wine grape	plastid	24.56	25.26
Bra012095.1-P	Field mustard	plastid	12.59	24.45
GSMUA_Achr2P22130_001	Banana	plastid	22.17	22.98
PGSC0003DMT400032725	Potato	nucleus	25.19	20.92
GSMUA_Achr6P10470_001	Banana	nucleus	23.68	20.91
Solyc01g105020.2.1	Tomato	nucleus, plastid	24.94	18.84

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra011448	EnsemblPlants:Bra011448.1
EnsemblPlants:Bra011448.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4D4P4	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320
PANTHER:PTHR12320:SF9	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002545CAB	SEG:seg

Description

AT4G33500 (E=1e-153) | protein phosphatase 2C-related / PP2C-related

Coordinates

chrA01:+:2128418..2131913

Molecular Weight (calculated)

86197.0 Da

IEP (calculated)

4.102

GRAVY (calculated)

-0.316

Length

794 amino acids

Sequence
(BLAST)

001: MADPLMVLSL QPHPFLIFSS SLNRRWGLSR SGIRFSVSEF RLRTSQLQLS NSTSPSQSSS SSTAPEKLDL VSSTQLKDGS HVFRFGDATE VERYLESEEK
101: ARCFELEKKQ RGKIAEEGVK DGHALVDLDP VSELESPKEK SAVKRKTVKS STETVSEKEE KAVHASLSSV IKIKDRKRVR SPVKKKKETS STVDVLGSGD
201: EVEAKVANSI VSVAEAIPTS STEEKTNENV EPLSSEVMEK VSVNEIRDCE TNGYNQLTES RVEEQAGPGS SSSEHDSQLN DLKEVIKVST VELDENLEEM
301: ENLMKTFEAE ENLVVEPTAT VALSPDELVD VSPEENLVVE PTATVAVSTD ELVVVSPEED LVVEPTATVA VSTDELVVVS PEEDLVVEPT ATVAVSTDEL
401: VVVSPEEDLV VEPTATVAVS TDELVVVSPE EDLVVEPTAT VAVSPDELVV TSPDELISTS EATNHSVEEI AETPVIDTSE VANDEENVAS TIEGEVVVID
501: SKNDNGSISK TVNDTNDEDL QLPEPETAGL QPIEVASDRE ELVSKSFYLE SGSASLQNPN KALAGREDAY FISDNNNWLG VADGVSQWSF EGISEGMYAQ
601: ELMSNCEKII SDETAEICDD PVHVLHRSVN ETKSSGSSTA LIAHLSNNEL HIANIGDSGF MVVRNRTVLQ KSSPMFHHFC FPLHITRGDD ILKLAEVYHV
701: NLEEGDVVIT ASDGLFDNLY EKEIVSIVCR LLEQGLEPQR IAELVAAKAQ EVGRSETERT PFGDAAKEEG HDGYRGGKLD AVTVIVSLVK TVSI

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.