CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68984	Canola	plastid	90.93	45.92
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	23.51	44.15
Bra011448.1-P	Field mustard	plastid	98.02	43.58
OQU91878	Sorghum	cytosol	24.65	43.07
HORVU5Hr1G117220.2	Barley	mitochondrion	23.51	37.9
AT4G33500.1	Thale cress	plastid	77.34	37.71
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	37.96	37.43
HORVU2Hr1G018620.1	Barley	cytosol	15.3	36.24
CDX75361	Canola	plastid	86.12	36.06
Os10t0370000-02	Rice	peroxisome	39.09	29.68
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	36.83	26.32
CDY10717	Canola	plastid	22.38	26.25
CDY02041	Canola	plastid	22.38	26.25
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	36.83	25.84
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	36.83	25.84
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	35.98	25.4
Os03t0192500-01	Rice	cytosol	38.53	23.9
TraesCS4D01G267000.1	Wheat	cytosol	37.39	23.87
TraesCS4B01G267400.1	Wheat	cytosol	37.39	23.74
TraesCS4A01G038300.1	Wheat	cytosol	37.11	23.69
Zm00001d014291_P001	Maize	plastid	37.68	23.54
CDY53852	Canola	plastid	26.63	22.98
CDY30759	Canola	plastid	26.63	22.93
CDY60192	Canola	mitochondrion	29.46	22.27
CDY40532	Canola	mitochondrion	29.46	22.17
KXG39979	Sorghum	cytosol	37.11	22.02
VIT_12s0055g01130.t01	Wine grape	plastid	41.64	19.04
KRH10513	Soybean	mitochondrion, plastid	39.66	17.99
GSMUA_Achr2P22130_001	Banana	plastid	38.81	17.89
PGSC0003DMT400032725	Potato	nucleus	41.64	15.38
GSMUA_Achr6P10470_001	Banana	nucleus	38.53	15.13
Solyc01g105020.2.1	Tomato	nucleus, plastid	40.23	13.51

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078K375	UniProt:A0A078K375
EnsemblPlants:CDY72337	ProteinID:CDY72337	ProteinID:CDY72337.1	GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:GSBRNA2T00027816001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR12320	PANTHER:PTHR12320:SF9	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EE8F3E

Description

BnaAnng40740DBnaAnng40740D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K375]

Coordinates

chrLK050284:-:73..2184

Molecular Weight (calculated)

38288.2 Da

IEP (calculated)

4.070

GRAVY (calculated)

-0.302

Length

353 amino acids

Sequence
(BLAST)

001: AVTPEEPVAV SPDELISTSE ATNHSVDETA ETPVIDTSEV ANDEENVAST IEGEVVVIDS KNDNGSISKT VNDTNDEDLQ LPEPETAGLQ PIEVASDREE
101: LVSKSFYLES GSASLQNPNK ALAGREDAYF ISDNNNWLGV ADGVSQWSFE GISEGMYAQE LMSNCEKIIS DETAEICDDP VHVLHRSVNE TKSSGSSTAL
201: IAHLSNNELH IANIGDSGFM VVRNRTVLQK SSPMFHHFCF PLHITRGDDI LKLAEVYHVN LEEGDVVITA SDGLFDNLYE KEIVSIVCRL LEQGLEPQRI
301: AELVAAKAQE VGRSETERTP FGDAAKEEGH DGYRGGKLDA VTVIVSLVKT VSI

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.