CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	55.46	92.18
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	24.2	76.6
HORVU2Hr1G018620.1	Barley	cytosol	17.48	69.8
HORVU5Hr1G117220.2	Barley	mitochondrion	25.21	68.49
Os03t0192500-01	Rice	cytosol	63.7	66.61
OQU91878	Sorghum	cytosol	22.02	64.85
TraesCS4A01G038300.1	Wheat	cytosol	58.32	62.75
TraesCS4D01G267000.1	Wheat	cytosol	57.98	62.39
TraesCS4B01G267400.1	Wheat	cytosol	56.97	60.97
CDY72337	Canola	cytosol, peroxisome	22.02	37.11
GSMUA_Achr2P22130_001	Banana	plastid	38.99	30.29
KXG31802	Sorghum	plastid	15.8	29.01
VIT_12s0055g01130.t01	Wine grape	plastid	35.97	27.72
EES07195	Sorghum	cytosol	14.45	25.83
OQU85364	Sorghum	cytosol	14.12	25.07
EER90674	Sorghum	mitochondrion, plastid	19.16	24.46
GSMUA_Achr6P10470_001	Banana	nucleus	35.29	23.36
CDX68984	Canola	plastid	27.06	23.03
KRH10513	Soybean	mitochondrion, plastid	30.08	23.01
EES05885	Sorghum	cytosol, mitochondrion, peroxisome, plastid	13.11	22.67
AT4G33500.1	Thale cress	plastid	26.55	21.82
Bra011448.1-P	Field mustard	plastid	28.4	21.28
PGSC0003DMT400032725	Potato	nucleus	31.26	19.46
Solyc01g105020.2.1	Tomato	nucleus, plastid	30.76	17.41
CDX75361	Canola	plastid	23.87	16.84

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1B6QPY4	GO:GO:0003674
GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG39979	ProteinID:KXG39979	ProteinID:KXG39979.1
PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF9
SMART:SM00331	SMART:SM00332	EnsemblPlantsGene:SORBI_3001G473300	SUPFAM:SSF81606	UniParc:UPI00081AC1ED	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:74540332..74545839

Molecular Weight (calculated)

61313.3 Da

IEP (calculated)

3.903

GRAVY (calculated)

-0.261

Length

595 amino acids

Sequence
(BLAST)

001: MDEVPATAAV LDFRPGSSPP RVSAVARRAA ECSPDTGGAD EATGGPGFGN TAAVSAELTG SNSAGPDIQA VDCDTSGGLA GGDAGGVEVL CLENAAELEL
101: VEPGVLDVRL GAPVEERHDR TLDSTGLGSD EAGETNGISL VEVSQSGSTS SLDATGSTGG YSLVEGSLPE ASCGAQRCEP EVHEVPTGSP ATVGFPSEDG
201: GSGFGIELND DVDGRNGLAG GELELSTDGD DAEDITEIAG ILCGERVEGM ETNSGQHEAS NGSTVPSEEG VDRMETSLDD SEASDGSTTQ DSDTDVETES
301: SVSSIEEQEA GYRAHIPQPD QAVCKVPKEN NMAGVKSSDR MTSVIESTLV LASGASMLPH PSKVLTGGED AYFIACDGWF GVADGVGQWS FEGINAGLYA
401: RELMDGCKKI VTETQGAPGM RTEDVLAKAA DEARCPGSST VLVAHFDGQV LHASNIGDSG FLVIRNGEVH KKSKPMTYGF NFPLQIEKGD DPFKIVQNYA
501: IDLQEGDVIV TASDGLFDNV YEEEVAGIVS KSLEADLRPT EIADLLVARA KEVGRCGFGR SPFSDSALAA GYLGYSGGKL DDVTVVVSIV RKSEV

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.