CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018331.1-P	Field mustard	plastid	99.0	98.68
CDY02041	Canola	plastid	97.67	97.67
AT2G30170.1	Thale cress	mitochondrion, plastid	86.05	86.91
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	53.16	64.26
KRH30165	Soybean	cytosol	45.18	61.26
VIT_06s0004g07360.t01	Wine grape	plastid	63.12	61.09
KRG98206	Soybean	cytosol	61.79	57.59
Solyc06g007350.2.1	Tomato	plastid	56.48	55.56
PGSC0003DMT400052991	Potato	plastid	55.81	54.9
TraesCS3D01G100600.1	Wheat	plastid	53.16	49.69
TraesCS3B01G116700.1	Wheat	plastid	53.16	49.69
TraesCS3A01G100000.1	Wheat	plastid	53.16	49.69
Os01t0164600-01	Rice	plastid	54.15	49.24
KXG31802	Sorghum	plastid	52.82	49.07
Zm00001d039745_P001	Maize	plastid	52.49	48.02
HORVU3Hr1G018110.1	Barley	plastid	53.16	45.33
CDY72337	Canola	cytosol, peroxisome	26.25	22.38
CDY53852	Canola	plastid	29.57	21.76
CDY30759	Canola	plastid	29.24	21.46
CDY60192	Canola	mitochondrion	31.56	20.34
CDY40532	Canola	mitochondrion	31.56	20.26
CDX68984	Canola	plastid	26.91	11.59
CDX75361	Canola	plastid	24.25	8.66

Protein Annotations

EnsemblPlants:CDY10717	EnsemblPlantsGene:GSBRNA2T00048515001	GO:A0A078FCI6	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PFAM:PF07228	PFscan:PS51746	ProteinID:CDY10717	ProteinID:CDY10717.1	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EF4C36	UniProt:A0A078FCI6	MapMan:1.1.1.4.1.4	:	:

Description

BnaA05g12190DBnaA05g12190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCI6]

Coordinates

chrLK032006:-:156783..158675

Molecular Weight (calculated)

32453.8 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.035

Length

301 amino acids

Sequence
(BLAST)

001: MAIPMTRMMV PQVSSSLRLS HPNLSNSTRV PLLCRCAPSQ LQPLRSGLSL SAGAHAIPHP DKIEKGGEDA LFVSSYRGGV IAVADGVSSW AEQDVDPSLF
101: SKELMANASR LVDDEEVRYD PGFLIEKAHT ATTSRGSATI IVAMLEEVGV LKIGNVGDCG LKLIRQGQII FSTTPQEHYF DCPFQLSSEG SAQTYMDASF
201: NIMEVKKGDV IVMGSDGLFD NVFDHEIVNI VTKHTDVAES SRLLAEVASS HSRDPGFESP YALEARAKGF DVPLWKKALG MKLTGGKLDD VTVIVAQVVD
301: S

Best Arabidopsis Sequence Match ( AT2G30170.1 )
(BLAST)

001: MAIPVTRMMV PHAIPSLRLS HPNPSRVDFL CRCAPSEIQP LRPELSLSVG IHAIPHPDKV EKGGEDAFFV SSYRGGVMAV ADGVSGWAEQ DVDPSLFSKE
101: LMANASRLVD DQEVRYDPGF LIDKAHTATT SRGSATIILA MLEEVGILKI GNVGDCGLKL LREGQIIFAT APQEHYFDCP YQLSSEGSAQ TYLDASFSIV
201: EVQKGDVIVM GSDGLFDNVF DHEIVSIVTK HTDVAESSRL LAEVASSHSR DTEFESPYAL EARAKGFDVP LWKKVLGKKL TGGKLDDVTV IVAKVVSS

Arabidopsis Description

Probable protein phosphatase 2C 26 [Source:UniProtKB/Swiss-Prot;Acc:O64730]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.