Factsheet for Bra026572.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	cytosol
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001650.1-P
Bra012351.1-P
Bra022192.1-P
Bra024285.1-P
Bra024548.1-P
Bra037773.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G02950.1	Bra012351.1-P	AT1G22920.1	21798944
AT2G02950.1	Bra024548.1-P	AT1G22920.1	21798944
AT2G02950.1	Bra001650.1-P	AT2G18790.1	10348744
AT2G02950.1	Bra022192.1-P	AT2G18790.1	10348744
AT2G02950.1	Bra024285.1-P	AT5G64330.1	16777956
AT2G02950.1	Bra037773.1-P	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09346	Canola	plastid	97.59	97.59
Bra017406.1-P	Field mustard	plastid	60.48	59.9
AT2G02950.1	Thale cress	plastid	58.31	55.13
Bra024800.1-P	Field mustard	nucleus, plastid	42.17	55.03
Bra019666.1-P	Field mustard	plastid	42.41	40.46
Bra016540.1-P	Field mustard	cytoskeleton, cytosol, nucleus	20.96	24.1
KRH70717	Soybean	nucleus	27.47	23.12
KRH74851	Soybean	nucleus, plastid	27.47	23.12
VIT_01s0026g02330.t01	Wine grape	nucleus	28.43	22.61
KRG99090	Soybean	cytosol, nucleus, peroxisome	26.75	22.02
KRH45905	Soybean	nucleus	27.47	21.39
GSMUA_Achr10P...	Banana	nucleus	16.87	20.0
GSMUA_Achr7P11570_001	Banana	cytosol, plastid	19.52	19.57

Protein Annotations

EnsemblPlants:Bra026572.1	EnsemblPlants:Bra026572.1-P	EnsemblPlantsGene:Bra026572	PANTHER:PTHR33781	PANTHER:PTHR33781:SF4	SEG:seg
UniParc:UPI00025466E8	UniProt:M4ECR2	MapMan:26.1.2.2.3	:	:	:

Description

AT2G02950 (E=9e-130) PKS1 | PKS1 (PHYTOCHROME KINASE SUBSTRATE 1); protein binding

Coordinates

chrA02:+:20343728..20344975

Molecular Weight (calculated)

45834.9 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.730

Length

415 amino acids

Sequence
(BLAST)

001: MVTLISSSAS TPKISFDFTK DNNYPSLNVP VSSSPSSSCL RSKEEAVVTT KTLMEPCKPL IINNNPEDDH ELGDEKKVVK KAPEEPEIGV FGAEKYFSGD
101: MDSDQSSSVL SLTKPEVERF VVEMKQTEKK STGTASVCTE SSWNSQSLLL KNKLVNSCNG SLQDKKTNSG QIQKVNNNKK SFLSNLRCKC CSDVDDKISV
201: KRSSDQDISA STRSKIENQL SSSVNLSTEP IKIQKQEELV HRKSPEVFGS PVNIEKKHTI PPWESRSEGS DSSSDLFEID NLTGKPKPFL TRQVSDYAPS
301: EVSIEWSVVT ESAAGFSVMS ECATSPVRRN RSSHIPRVPT KNAPQIRKTN SGSRSGGFLL SCKGYKSVMV SGDSERRSSM NKNKNKTSPS YVPRFPMETT
401: KPKSLETRRK FSVKL

Best Arabidopsis Sequence Match ( AT2G02950.1 )
(BLAST)

001: MVTLTPSSAS TPKTSFDFMK NNNSHSSLYV SSSSYLSSKE DALVTTKKLM EPSKTLNMSI NPKQEEFGDE KKMVKKAPED PEIGVFGAEK YFNGDMDSDQ
101: GSSVLSLTNP EVERTVVDSK QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN LGCKCACSDG DSVDVEEKTS
201: VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR
301: QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ
401: PSYVPRFPME TTKPKSFETR RRISNSSISH TQSSLLYSQ

Arabidopsis Description

PKS1Protein PHYTOCHROME KINASE SUBSTRATE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWI1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.