Factsheet for AT2G02950.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45189	Canola	plastid	65.38	69.49
Bra024800.1-P	Field mustard	nucleus, plastid	49.89	68.87
CDY03026	Canola	plastid	60.14	67.35
Bra017406.1-P	Field mustard	plastid	61.28	64.2
CDY17423	Canola	plastid	61.28	64.05
CDY60835	Canola	plastid	59.23	61.9
CDY62179	Canola	plastid	55.81	59.32
CDY09346	Canola	plastid	55.58	58.8
Bra026572.1-P	Field mustard	plastid	55.13	58.31
AT1G14280.1	Thale cress	plastid	46.47	46.15
AT1G18810.1	Thale cress	nucleus	23.92	27.13
KRH74851	Soybean	nucleus, plastid	30.3	26.98
VIT_01s0026g02330.t01	Wine grape	nucleus	31.66	26.63
KRH70717	Soybean	nucleus	29.84	26.57
KRG99090	Soybean	cytosol, nucleus, peroxisome	29.61	25.79
KRH45905	Soybean	nucleus	30.07	24.77
GSMUA_Achr10P...	Banana	nucleus	19.36	24.29
GSMUA_Achr7P11570_001	Banana	cytosol, plastid	20.73	21.98

Protein Annotations

MapMan:26.1.2.2.3	EntrezGene:814823	ProteinID:AAC32913.1	ProteinID:AEC05643.1	EMBL:AF149053	EMBL:AF325064
ArrayExpress:AT2G02950	EnsemblPlantsGene:AT2G02950	RefSeq:AT2G02950	TAIR:AT2G02950	RefSeq:AT2G02950-TAIR-G	EnsemblPlants:AT2G02950.1
TAIR:AT2G02950.1	EMBL:AY052708	EMBL:AY063721	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009585	GO:GO:0009605
GO:GO:0009606	GO:GO:0009628	GO:GO:0009638	GO:GO:0009958	GO:GO:0009987	GO:GO:0010017
GO:GO:0010114	GO:GO:0010218	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
RefSeq:NP_565292.1	Symbol:PKS1	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PANTHER:PTHR33781	PANTHER:PTHR33781:SF4	UniProt:Q9SWI1	UniParc:UPI0000131B8A	SEG:seg	:

Description

PKS1Protein PHYTOCHROME KINASE SUBSTRATE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWI1]

Coordinates

chr2:-:854077..856725

Molecular Weight (calculated)

48087.3 Da

IEP (calculated)

9.561

GRAVY (calculated)

-0.733

Length

439 amino acids

Sequence
(BLAST)

001: MVTLTPSSAS TPKTSFDFMK NNNSHSSLYV SSSSYLSSKE DALVTTKKLM EPSKTLNMSI NPKQEEFGDE KKMVKKAPED PEIGVFGAEK YFNGDMDSDQ
101: GSSVLSLTNP EVERTVVDSK QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN LGCKCACSDG DSVDVEEKTS
201: VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR
301: QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ
401: PSYVPRFPME TTKPKSFETR RRISNSSISH TQSSLLYSQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.